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Publications

Varveri A, Papadopoulou M, Papadovasilakis Z, Compeer EB, Legaki AI, Delis A, Damaskou V, Boon L, Papadogiorgaki S, Samiotaki M, Foukas PG, Eliopoulos AG, Hatzioannou A, Alissafi T, Dustin ML, Verginis P. (2024) Immunological synapse formation between T regulatory cells and cancer-associated fibroblasts promotes tumour development. Nat Commun. 15:4988.
[Abstract]
Layouni S, Remadi L, Kidar A, Chaâbane-Banaoues R, Haouas N, Babba H. (2024) Clinical polymorphism of zoonotic cutaneous leishmaniasis: combination of the clinical and the parasitological diagnosis. Parasitol Res. 123:238.
[Abstract]
Kallemi P, Verret F, Andronis C, Ioannidis N, Glampedakis N, Kotzabasis K, Kalantidis K. (2024) Stress-related transcriptomic changes associated with GFP transgene expression and active transgene silencing in plants. Sci Rep. 14:13314.
[Abstract]
Charmpilas N, Sotiriou A, Axarlis K, Tavernarakis N, Hoppe T. (2024) Reproductive regulation of the mitochondrial stress response in Caenorhabditis elegans. Cell Rep. 43:114336. doi: 10.1016/j.celrep.2024.114336. Online ahead of print.
[Abstract]
Stratigi K, Siametis A, Garinis GA. (2024) Looping forward: exploring R-loop processing and therapeutic potential. FEBS Lett. doi: 10.1002/1873-3468.14947. Online ahead of print.
[Abstract]
Xiong W, Chai J, Wu J, Li J, Lu W, Tian M, Jmel MA, Ippel JH, Kotsyfakis M, Dijkgraaf I, Liu S, Xu X. (2024) Cathelicidin-HG Alleviates Sepsis-Induced Platelet Dysfunction by Inhibiting GPVI-Mediated Platelet Activation. Research (Wash D C). 7:0381.
[Abstract]
Stavgiannoudaki I, Goulielmaki E, Garinis GA. (2024) Broken strands, broken minds: Exploring the nexus of DNA damage and neurodegeneration. DNA Repair (Amst). 140:103699. doi: 10.1016/j.dnarep.2024.103699. Online ahead of print.
[Abstract]
Mentzelopoulou A, Liu C, Moschou PN. (2024) Protein Detection and Localization in Plant Cells Using Spot-Tagging. Physiol Plant. 176:e14351.
[Abstract]
Rubio-Tomás T, Soler-Botija C, Martínez-Estrada O, Villena JA. (2024) Transcriptional control of cardiac energy metabolism in health and disease: Lessons from animal models. Biochem Pharmacol. 224:116185.
[Abstract]
Ravasi D, Topalis P, Puggioli A, Leo C, Flacio E, Papagiannakis G, Balestrino F, Martelli M, Bellini R. (2024) Random mutations induced by a sub-sterilizing dose of gamma ray on Aedes albopictus male pupae and transmission to progeny. Acta Trop. 107271. doi: 10.1016/j.actatropica.2024.107271. Online ahead of print.
[Abstract]
Kostopoulou M, Mukhtyar CB, Bertsias G, Boumpas DT, Fanouriakis A. (2024) Management of systemic lupus erythematosus: a systematic literature review informing the 2023 update of the EULAR recommendations. Ann Rheum Dis. ard-2023-225319. doi: 10.1136/ard-2023-225319. Online ahead of print.
[Abstract]
Chamilos G, Garre V. (2024) Editorial: Advancements in the understanding of Mucorales biology and the management of mucormycosis. Front Cell Infect Microbiol. 14:1427252.
[Abstract]
Naoumi N, Araya-Farias M, Megariti M, Alexandre L, Papadakis G, Descroix S, Gizeli E. (2024) Acoustic detection of a mutation-specific Ligase Chain Reaction based on liposome amplification. Analyst. doi: 10.1039/d3an02142d. Online ahead of print.
[Abstract]
Ateutchia-Ngouanet S, Nanfack-Minkeu F, Mavridis K, Wanji S, Demanou M, Vontas J, Djouaka R. (2024) Monitoring Aedes populations for arboviruses, Wolbachia, insecticide resistance and its mechanisms in various agroecosystems in Benin. Acta Trop. 253:107178.
[Abstract]
Siametis A, Stratigi K, Giamaki D, Chatzinikolaou G, Akalestou-Clocher A, Goulielmaki E, Luke B, Schumacher B, Garinis GA. (2024) Transcription stress at telomeres leads to cytosolic DNA release and paracrine senescence. Nat Commun. 15:4061.
[Abstract]
Plaitakis A, Sidiropoulou K, Kotzamani D, Litso I, Zaganas I, Spanaki C. (2024) Evolution of Glutamate Metabolism via GLUD2 Enhances Lactate-Dependent Synaptic Plasticity and Complex Cognition. Int J Mol Sci. 25:5297.
[Abstract]
Chen R, Chen K, Yao X, Zhang X, Yang Y, Su X, Lyu M, Wang Q, Zhang G, Wang M, Li Y, Duan L, Xie T, Li H, Yang Y, Zhang H, Guo Y, Jia G, Ge X, Sarris PF, Lin T, Sun D. (2024) Genomic analyses reveal the stepwise domestication and genetic mechanism of curd biogenesis in cauliflower. Nat Genet. doi: 10.1038/s41588-024-01744-4. Online ahead of print.
[Abstract]
Arvanitaki ES, Goulielmaki E, Gkirtzimanaki K, Niotis G, Tsakani E, Nenedaki E, Rouska I, Kefalogianni M, Xydias D, Kalafatakis I, Psilodimitrakopoulos S, Karagogeos D, Schumacher B, Stratakis E, Garinis GA. (2024) Microglia-derived extracellular vesicles trigger age-related neurodegeneration upon DNA damage. Proc Natl Acad Sci U S A. 121:e2317402121.
[Abstract]
Gonçalves SM, Pereira I, Feys S, Cunha C, Chamilos G, Hoenigl M, Wauters J, van de Veerdonk FL, Carvalho A. (2024) Integrating genetic and immune factors to uncover pathogenetic mechanisms of viral-associated pulmonary aspergillosis. mBio. e0198223. doi: 10.1128/mbio.01982-23. Online ahead of print.
[Abstract]
Yildiz BO, Boguszewski CL, da Silva Boguszewski MC, Busetto L, Celik O, Fuleihan GE, Goulis DG, Hammer GD, Haymart MR, Kaltsas G, Law JR, Lim AYL, Luger A, Macut D, McGowan B, McClung M, Miras AD, Patti ME, Peeters RP, Pignatelli D, Saeed H, Sipos J, Stratakis CA, Tsoli M, van der Lely AJ, Witchel SF, Yazici D. (2024) EndoBridge 2023: highlights and pearls. Hormones (Athens). doi: 10.1007/s42000-024-00549-8. Online ahead of print.
[Abstract]
Tatsi C, Pitsava G, Faucz FR, Keil M, Stratakis CA. (2024) The spectrum of growth hormone excess in Carney complex and genotype-phenotype correlations. J Clin Endocrinol Metab. dgae253. doi: 10.1210/clinem/dgae253. Online ahead of print. PMID: 38626285
[Abstract]
Nikolopoulos D, Loukogiannaki C, Sentis G, Garantziotis P, Manolakou T, Kapsala N, Nikoloudaki M, Pieta A, Flouda S, Parodis I, Bertsias G, Fanouriakis A, Filia A, Boumpas DT. (2024) Disentangling the riddle of systemic lupus erythematosus with antiphospholipid syndrome: blood transcriptome analysis reveals a less-pronounced IFN-signature and distinct molecular profiles in venous versus arterial events. Ann Rheum Dis. ard-2024-225664. doi: 10.1136/ard-2024-225664. Online ahead of print.
[Abstract]
Tsimpolis A, Kalafatakis K, Charalampopoulos I. (2024) Recent advances in the crosstalk between the brain-derived neurotrophic factor and glucocorticoids. Front Endocrinol (Lausanne). 15:1362573.
[Abstract]
Pagkalos M, Makarov R, Poirazi P. (2024) Leveraging dendritic properties to advance machine learning and neuro-inspired computing. Curr Opin Neurobiol. 85:102853.
[Abstract]
Wang HL, Siow R, Schmauck-Medina T, Zhang J, Sandset PM, Filshie C, Lund Ø, Partridge L, Bergersen LH, Juel Rasmussen L, Palikaras K, Sotiropoulos I, Storm-Mathisen J, Rubinsztein DC, Spillantini MG, De Zeeuw CI, Watne LO, Vyhnalek M, Veverova K, Liang KX, Tavernarakis N, Bohr VA, Yokote K, Saarela J, Nilsen H, Gonos ES, Scheibye-Knudsen M, Chen G, Kato H, Selbæk G, Fladby T, Nilsson P, Simonsen A, Aarsland D, Lautrup S, Ottersen OP, Cox LS, Fang EF. (2024) Meeting summary of The NYO3 5th NO-Age/AD meeting and the 1st Norway-UK joint meeting on ageing and dementia: recent progress on the mechanisms and interventional strategies. J Gerontol A Biol Sci Med Sci. 79:glae029.
[Abstract]
Katsavou E, Sarafoglou C, Balabanidou V, Skoufa E, Nauen R, Linka M, Geibel S, Denecke S, Vontas J. (2024) Characterisation of lepidopteran geranylgeranyl diphosphate synthase as a putative pesticide target. Insect Mol Biol. 33:147-156.
[Abstract]
Superti-Furga G, Agostinho M, Bury J, Cook S, Durinx C, Ender A, van Luenen H, Lund AH, Medema RH, Miączyńska M, Nickel D, Pelicci PG, Puisieux A, Ripatti S, Sander M, Schubeler D, Serrano L, Sommer T, Sonne-Hansen K, Tomančák P, Vives J, Vontas J, Bettencourt-Dias M. (2024) EU-LIFE charter of independent life science research institutes. FEBS Lett. 598:719-724.
[Abstract]
Dedemadi AG, Gkolfinopoulou C, Nikoleri D, Nikoloudaki M, Ruhanen H, Holopainen M, Kakela R, Christopoulou G, Bournazos S, Constantoulakis P, Sidiropoulos P, Bertsias G, Chroni A. (2024) Improvement of high-density lipoprotein atheroprotective properties in patients with systemic lupus erythematosus after belimumab treatment. Rheumatology (Oxford). keae192. doi: 10.1093/rheumatology/keae192. Online ahead of print.
[Abstract]
Petratou D, Fragkiadaki P, Lionaki E, Tavernarakis N. (2024) Assessing locomotory rate in response to food for the identification of neuronal and muscular defects in C. elegans. STAR Protoc. 5:102801.
[Abstract]
Magkouta S, Veroutis D, Pousias A, Papaspyropoulos A, Giannetti K, Pippa N, Lougiakis N, Kambas K, Lagopati N, Polyzou A, Georgiou M, Chountoulesi M, Pispas S, Foutadakis S, Kyrodimos E, Pouli N, Marakos P, Kotsinas A, Verginis P, Valakos D, Vatsellas G, Petty R, Thanos D, Demaria M, Evangelou K, Di Micco R, Gorgoulis VG. (2024) One-step rapid tracking and isolation of senescent cells in cellular systems, tissues, or animal models via GLF16. STAR Protoc. 5:102929.
[Abstract]
Rubio-Tomás T, Alegre-Cortés E, Lionaki E, Fuentes JM, Tavernarakis N. (2024) Heat shock and thermotolerance in Caenorhabditis elegans: An overview of laboratory techniques. Methods Cell Biol. 185:1-17.
[Abstract]
Pitsigavdaki S, Nikoloudaki M, Garantziotis P, Silvagni E, Repa A, Marangoni A, Flouri I, Avgoustidis N, Parperis K, Fanouriakis A, Govoni M, Sidiropoulos P, Boumpas DT, Bortoluzzi A, Bertsias G. (2024) Pragmatic targets for moderate/severe SLE and their implications for clinical care and trial design: sustained DORIS or LLDAS for at least 6 months is sufficient while their attainment for at least 24 months ensures high specificity for damage-free progression. Ann Rheum Dis. 83:464-474.
[Abstract]
Molfetas AS, Boutris N, Tomatsidou A, Kokkinidis M, Fadouloglou VE. (2024) Variations of the NodB Architecture Are Attuned to Functional Specificities into and beyond the Carbohydrate Esterase Family 4. Biomolecules. 14:325.
[Abstract]
Veneti Z, Fasoulaki V, Kalavros N, Vlachos IS, Delidakis C, Eliopoulos AG. (2024) Polycomb-mediated silencing of miR-8 is required for maintenance of intestinal stemness in Drosophila melanogaster. Nat Commun. 15:1924.
[Abstract]
Preira CMF, Pizzi E, Fratini F, Grasso F, Boccolini D, Mochi S, Favia G, Piselli E, Damiani C, Siden-Kiamos I, Ponzi M, Currà C. (2024) A time point proteomic analysis reveals protein dynamics of Plasmodium oocysts. Mol Cell Proteomics. 23:100736.
[Abstract]
Zota I, Chanoumidou K, Charalampopoulos I, Gravanis A. (2024) Dynamics of myelin deficits in the 5xFAD mouse model for Alzheimer's disease and the protective role of BDNF. Glia. 72:809-827.
[Abstract]
Naalden D, Dermauw W, Ilias A, Baggerman G, Mastop M, Silven JJM, van Kleeff PJM, Dangol S, Gaertner NF, Roseboom W, Kwaaitaal M, Kramer G, van den Burg HA, Vontas J, Van Leeuwen T, Kant MR, Schuurink RC. (2024) Interaction of Whitefly Effector G4 with Tomato Proteins Impacts Whitefly Performance. Mol Plant Microbe Interact. 37:98-111.
[Abstract]
Zafar Z, Wood MJ, Fatima S, Bhatti MF, Shah FA, Saud Z, Loveridge EJ, Karaca I, Butt TM. (2024) Identification of the odorant binding proteins of Western Flower Thrips ( Frankliniella occidentalis), characterization and binding analysis of FoccOBP3 with molecular modelling, molecular dynamics simulations and a confirmatory field trial. J Biomol Struct Dyn. 1-16. doi: 10.1080/07391102.2024.2317990. Online ahead of print.
[Abstract]
Liu C, Mentzelopoulou A, Hatzianestis IH, Tzagkarakis E, Skaltsogiannis V, Ma X, Michalopoulou VA, Romero-Campero FJ, Romero-Losada AB, Sarris PF, Marhavy P, Bölter B, Kanterakis A, Gutierrez-Beltran E, Moschou PN. (2024) A proxitome-RNA-capture approach reveals that processing bodies repress coregulated hub genes. Plant Cell. 36:559-584.
[Abstract]
Bortoluzzi A, Fanouriakis A, Silvagni E, Appenzeller S, Carli L, Carrara G, Cauli A, Conti F, Costallat LTL, De Marchi G, Doria A, Fredi M, Franceschini F, Garaffoni C, Hanly JG, Mosca M, Murphy E, Piga M, Quartuccio L, Scirè CA, Tomietto P, Truglia S, Zanetti A, Zen M, Bertsias G, Govoni M. (2024) Therapeutic Strategies and Outcomes in Neuropsychiatric Systemic Lupus Erythematosus: An International Multicenter Retrospective Study. Rheumatology (Oxford). keae119. doi: 10.1093/rheumatology/keae119. Online ahead of print.
[Abstract]
Pagkalos M, Makarov R, Poirazi P. (2024) Leveraging dendritic properties to advance machine learning and neuro-inspired computing. Curr Opin Neurobiol. 85:102853. doi: 10.1016/j.conb.2024.102853. Online ahead of print.
[Abstract]
Wu H, Jmel MA, Chai J, Tian M, Xu X, Hui Y, Nandakumar KS, Kotsyfakis M. (2024) Tick cysteine protease inhibitors suppress immune responses in mannan-induced psoriasis-like inflammation. Front Immunol. 15:1344878.
[Abstract]
Oraiopoulou ME, Tzamali E, Psycharakis SE, Tzedakis G, Makatounakis T, Manolitsi K, Drakos E, Vakis AF, Zacharakis G, Papamatheakis J, Sakkalis V. (2024) The Temozolomide-Doxorubicin paradox in Glioblastoma in vitro-in silico preclinical drug-screening. Sci Rep. 14:3759.
[Abstract]
Albaz E, Katsavou E, Cagatay NS, Ioannidis P, Ilias A, Mylona K, Kremi K, Roditakis E, Guz N, Vontas J. (2024) Analysis of insecticide resistance and de novo transcriptome assembly of resistance associated genes in the European grapevine moth, Lobesia botrana (Lepidoptera: Tortricidae). Bull Entomol Res. 114:88-98.
[Abstract]
Paronyan L, Babayan L, Vardanyan H, Manucharyan A, Papapostolou KM, Balaska S, Vontas J, Mavridis K. (2024) Molecular monitoring of insecticide resistance in major disease vectors in Armenia. Parasit Vectors. 17:54.
[Abstract]
Voulgareli I, Semitekolou M, Morianos I, Blizou M, Sfika M, Hillas G, Bakakos P, Loukides S. (2024) Endotyping Eosinophilic Inflammation in COPD with ELAVL1, ZfP36 and HNRNPD mRNA Genes. J Clin Med. 13:854.
[Abstract]
Astara K, Tsimpolis A, Kalafatakis K, Vavougios GD, Xiromerisiou G, Dardiotis E, Christodoulou NG, Samara MT, Lappas AS. (2024) Sleep disorders and Alzheimer's disease pathophysiology: The role of the Glymphatic System. A scoping review. Mech Ageing Dev. 217:111899.
[Abstract]
Mylonakis M, Tserevelakis GJ, Vlachos G, Fanouraki E, Pavlopoulos A, Pavlidis M, Zacharakis G. (2024) Bimodal optical and optoacoustic multiview microscope in the frequency-domain. Opt Lett. 49:462-465.
[Abstract]
Michaelidou K, Karniadakis I, Pantelaion V, Koutoulaki C, Mpoukla E, Folinas K, Dimaras P, Papadaki MA, Koutsopoulos AV, Mavroudis D, Vourlakou C, Mavridis K, Agelaki S. (2024) Rapid and reliable testing for clinically actionable EGFR mutations in non-small cell lung cancer using the IdyllaTM platform: A real-world two-center experience in Greece. Expert Rev Mol Diagn. 24:89-98.
[Abstract]
Flouri I, Goutakoli P, Repa A, Bertsias A, Avgoustidis N, Eskitzis A, Pitsigavdaki S, Kalogiannaki E, Terizaki M, Bertsias G, Sidiropoulos P. (2024) Distinct long-term disease activity trajectories differentiate early on treatment with etanercept in both rheumatoid arthritis and spondylarthritis patients: a prospective cohort study. Rheumatol Int. 44:249-261.
[Abstract]
Weinberg JR, Voudouri M, Keil M, Stratakis CA, Tatsi C. (2024) The utility of IGF1 in the evaluation of pediatric patients with endogenous hypercortisolemia. Pediatr Res. 95:758-761.
[Abstract]
Sakka MK, Mavridis K, Papapostolou KM, Riga M, Vontas J, Athanassiou CG. (2024) Development, application and evaluation of three novel TaqMan qPCR assays for phosphine resistance monitoring in major stored product pests Tribolium castaneum and Rhyzopertha dominica. Pest Manag Sci. 80:275-281.
[Abstract]
Sotiriou A, Ploumi C, Charmpilas N, Tavernarakis N. (2024) Assessing polyglutamine tract aggregation in the nematode Caenorhabditis elegans. Methods Cell Biol. 181:1-15.
[Abstract]
Bertsias G, Askanase A, Doria A, Saxena A, Vital EM. (2024) A path to Glucocorticoid Stewardship: a critical review of clinical recommendations for the treatment of systemic lupus erythematosus. Rheumatology (Oxford). keae041. doi: 10.1093/rheumatology/keae041. Online ahead of print.
[Abstract]
Filippopoulou C, Thomé CC, Perdikari S, Ntini E, Simos G, Bohnsack KE, Chachami G. (2024) Hypoxia-driven deSUMOylation of EXOSC10 promotes adaptive changes in the transcriptome profile. Cell Mol Life Sci. 81:58.
[Abstract]
Vergadi E, Kolliniati O, Lapi I, Ieronymaki E, Lyroni K, Alexaki VI, Diamantaki E, Vaporidi K, Hatzidaki E, Papadaki HA, Galanakis E, Hajishengallis G, Chavakis T, Tsatsanis C. (2024) An IL-10/DEL-1 axis supports granulopoiesis and survival from sepsis in early life. Nat Commun. 15:680.
[Abstract]
Somalou P, Ieronymaki E, Feidaki K, Prapa I, Stylianopoulou E, Spyridopoulou K, Skavdis G, Grigoriou ME, Panas P, Argiriou A, Tsatsanis C, Kourkoutas Y. (2024) Novel Wild-Type Pediococcus and Lactiplantibacillus Strains as Probiotic Candidates to Manage Obesity-Associated Insulin Resistance. Microorganisms. 12:231.
[Abstract]
Spanaki C, Sidiropoulou K, Petraki Z, Diskos K, Konstantoudaki X, Volitaki E, Mylonaki K, Savvaki M, Plaitakis A. (2024) Glutamate-specific gene linked to human brain evolution enhances synaptic plasticity and cognitive processes. iScience. 27:108821.
[Abstract]
Antonijevic M, Charou D, Davis A, Curel T, Valcarcel M, Ramos I, Villacé P, Claeysen S, Dallemagne P, Gravanis A, Charalampopoulos I, Rochais C. (2024) Development of Pleiotropic TrkB and 5-HT4 Receptor Ligands as Neuroprotective Agents. Molecules. 29:515.
[Abstract]
Bertsias A, Flouri ID, Repa A, Avgoustidis N, Kalogiannaki E, Pitsigavdaki S, Bertsias G, Sidiropoulos P. (2024) Patterns of comorbidities differentially affect long-term functional evolution and disease activity in patients with 'difficult to treat' rheumatoid arthritis. RMD Open. 10:e003808.
[Abstract]
Sewduth RN, Georgelou K. (2024) Relevance of Carcinogen-Induced Preclinical Cancer Models. J Xenobiot. 14:96-109.
[Abstract]
Pyrris Y, Papadaki GF, Mikros E, Diallinas G. (2024) The last two transmembrane helices in the APC-type FurE transporter act as an intramolecular chaperone essential for concentrative ER-exit. Microb Cell. 11:1-15.
[Abstract]
Troullinou E, Tsagkatakis G, Losonczy A, Poirazi P, Tsakalides P. (2024) A Generative Neighborhood-Based Deep Autoencoder for Robust Imbalanced Classification. IEEE Trans Artif Intell. 5:80-91.
[Abstract]
Tatsi C, Kamilaris C, Keil M, Saidkhodjaeva L, Faucz FR, Chittiboina P, Stratakis CA. (2024) Paediatric Cushing syndrome: a prospective, multisite, observational cohort study. Lancet Child Adolesc Health. 8:51-62.
[Abstract]
Pogorevc N, Dotsev A, Upadhyay M, Sandoval-Castellanos E, Hannemann E, Simčič M, Antoniou A, Papachristou D, Koutsouli P, Rahmatalla S, Brockmann G, Sölkner J, Burger P, Lymberakis P, Poulakakis N, Bizelis I, Zinovieva N, Horvat S, Medugorac I. (2024) Whole-genome SNP genotyping unveils ancestral and recent introgression in wild and domestic goats. Mol Ecol. 33:e17190.
[Abstract]
Grypioti E, Richard H, Kryovrysanaki N, Jaubert M, Falciatore A, Verret F, Kalantidis K. (2024) Dicer-dependent heterochromatic small RNAs in the model diatom species Phaeodactylum tricornutum. New Phytol. 241:811-826.
[Abstract]
Kefi M, Konstantinos P, Balabanidou V, Sarafoglou C, Tsakireli D, Douris V, Monastirioti M, Maréchal JD, Feyereisen R, Vontas J. (2024) Insights into unique features of Drosophila CYP4G enzymes. Insect Biochem Mol Biol. 164:104041.
[Abstract]
Vandenhole M, Lu X, Tsakireli D, Mermans C, De Rouck S, De Beer B, Simma E, Pergantis SA, Jonckheere W, Vontas J, Van Leeuwen T. (2024) Contrasting roles of cytochrome P450s in amitraz and chlorfenapyr resistance in the crop pest Tetranychus urticae. Insect Biochem Mol Biol. 164:104039.
[Abstract]