IMBB

Macromolecular Structures Group

Selected Publications (1990-1995)

  1. Athanasiadis, A., Gregoriou, M., Thanos, D., Kokkinidis, M. and Papamatheakis, J. (1990) Complete nucleotide sequence of the Pvu II restriction enzyme gene from Proteus vulgaris. Nucl Acid Res 18: 6434.

  2. Brziat, G., Etienne, J., Kokkinidis, M., Olivier, J.L. and Parnas, P. (1990) New trends in mammalian non-pancreatic phospholipase A2 research. Journal of Lipid Mediators 2: 159-172.

  3. Kokkinidis, M. and Vlassi, M. (1990) Analysis of Sequence/Structure Relationships in 4-á-Helix Bundles. Acta Cryst. A46: C-97-98.

  4. Kokkinidis, M., Gessmann, R., Vlassi, M. and Brueckner, H. (1990) Structures of Model Peptides containing á-Aminoisobutyric acid (Aib). Acta Cryst. A46: C-140.

  5. Athanasiadis, A. and Kokkinidis, M. (1991) Purification, crystallization and preliminary X-ray diffraction studies of the PvuII endonuclease. J Mol Biol 222: 451-453.

  6. Gessmann, R., Brueckner, H. and Kokkinidis, M. (1991) Structural Flexibility of Aib-containing Peptides: The N-terminal Tripeptide of Trichotoxin. Biochem Biophys Res Commun 174: 878-884.

  7. Gessmann, R., Brueckner, H. and Kokkinidis, M. (1991) The crystal structure of Z-Aib-Gly-Aib-Leu-Aib-OtBu, the synthetic, protected N-terminal pentapeptide of trichotoxin. Peptide Research 4: 239-244.

  8. Paliakasis, C.D. and Kokkinidis, M. (1991) The stability of 4-alpha-helix bundles. Prot Engineering 4: 849-850.

  9. Eklund, H., Ingelman, M., Soederbert, B.-O., Uhlin, T., Nordlund, P., Nikkola, M., Sonnerstam, U., Joelson, T. and Petratos, K. (1992) Structure of Oxidized Bacteriophage T4 Glutaredoxin (Thioredoxin). Refinement of Native and Mutant Proteins. J Mol Biol 228(2): 596-618.

  10. Paliakasis, C.D. and Kokkinidis, M. (1992) Relationships between sequence and structure for the four-á-helix bundle tertiary motif in proteins. Prot. Engineering 5: 739-749.

  11. Vlassi, M., Brueckner, H. and Kokkinidis, M. (1992) Peptides with built-in conformational constraints: The crystal structure of Z-(Aib)6-OtBut. Z Kristall 202: 89-98.

  12. Fotinou, C., Kokkinidis, M., Fritzsch, G., Haase, W., Michel, H. and Ghanotakis, D.F. (1993) Characterization of a Photosystem II core and its three-dimensional crystals. Photosynthesis Res 37: 41-48.

  13. Gessmann, R., Vlassi, M., Brueckner, H. and Kokkinidis, M. (1993) Folding and intermolecular interactions of Aib-containing peptides. In ÒPeptides 1992Ó, pp. 491- 492, C.H. Schneider and A.N. Eberle, eds., Escom Science, Leiden, The Netherlands.

  14. Kokkinidis, M., Vlassi, M., Papanikolaou, Y., Kotsifaki, D., Kingswell, A., Tsernoglou, D. and Hinz, H.-J. (1993) Correlation between protein stability and crystal properties of designed ROP variants. Proteins 16: 214-217.

  15. Miller, W., Mindrinos, M.N., Rahme, L.G., Frederick, R.D., Grimm, C., Gessman, R., Kyriakides, X., Kokkinidis, M. and Panopoulos, N.J. (1993) Pseudomonas syringae pv. phaseolicola-plant interactions: Host-pathogen signalling through cascade control of rhp gene expression. p. 267-274. In "Advances in Molecular Genetics of Plant-Microbe Interactions", E.W. Nester and D.P.S. Verma eds., Kluwer Academic, Dordrecht, The Netherlands.

  16. Steif, Ch., Weber, P., Hinz, H.-J., Flossdorf, J., Cesareni, G. and Kokkinidis, M. (1993) Subunit interactions provide a significant contribution to the stability of the dimeric four-á-helical bundle protein ROP. Biochemistry 32: 3867- 376.

  17. Vlassi, M., Brueckner, H. and Kokkinidis, M. (1993) Peptides with built-in conformational constraints: The crystal structure of Z-(Aib)7-OtBut. Acta Cryst B49:560-564.

  18. Winkler, F.K., Banner, D.W., Oefner, Ch., Tsernoglou, D., Brown, R.S., heathman, S.P., Bryan, R.K., Martin, P.D., Petratos, K. and Wilson, K.S. (1993) The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments. EMBO J. 12(5): 1781-1795.

  19. Al-Karadaghi, S., Cedergren-Zepperzauer, E.S., Hoevmoller, S., Petratos, K., Terry, H. and Wilson, K.S. (1994) Refined Crystal Structure of Liver Alcohol Dehydrogenase-NADH Complex at 1.8 A Resolution. Acta Cryst D50: 793-807.

  20. Athanasiadis, A., Vlassi, M., Kotsifaki, D., Tucker, P., Wilson, K.S. and Kokkinidis, M. (1994) The crystal structure of PvuII endonuclease reveals extensive structural homologies to EcoRV. Nature, Structural Biology 1: 469-475.

  21. Gessmann, R., Brueckner, H. and Kokkinidis, M. (1994) The crystal structure of Z-Leu-Aib-Pro-Leuol, the synthetic, protected C-terminal tetrapeptide of trichovirin. Z. Kristallographie 209: 587-603.

  22. Vakoufari, E., Wilson, K.S. and Petratos, K. (1994) The Crystal Structures of Reduced Pseudoazurin from Alcaligenes faecalis S-6 at two pH values. FEBS Letters 347: 203-206.

  23. Vlassi, M., Steof, Ch., Weber, P. Tsernoglou, D., Wilson, K.S., Hinz, H.-J. and Kokkinidis, M. (1994) Restored heptad pattern continuity does not alter the folding of a 4-á-helical bundle. Nature, Structural Biology 1: 706-716.

  24. Petratos, K., Papadovasiilaki, M. and Dauter, Z. (1995) The crystal structure of Apo-Pseudoazurin from A. faecalis S-6. FEBS Lett. 368: 432-434.
N.B. The publication #1 has also been listed in the Mammalian Molecular Biology section and the publication #18 in the Plant Molecular Biology section.