Comparison of T3SS components and effectors of 10 E. coli strains
Comparison of T3SSs and effectors of 10 E. coli strains [Iguchi 2009]
|
Strain |
|
||||||
Effector |
E2348/69 |
UTI89, CFT073, 536, APEC O1 |
Sakai |
MG1655 |
HS |
E24377A |
B171 |
|
EspB |
1 |
0 |
1 |
0 |
0 |
0 |
1 |
Effectors in PPs and IEs |
EspF |
1 |
0 |
1 |
0 |
0 |
0 |
1 |
" |
EspG |
2 |
0 |
1 |
0 |
0 |
0 |
1 |
" |
EspH |
1 |
0 |
1 |
0 |
0 |
0 |
1 |
" |
EspJ |
1 |
0 |
1 |
0 |
0 |
0 |
0 |
" |
EspK |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
" |
EspL |
2 (1) b |
0 |
1 |
0 |
0 |
0 |
1 |
" |
EspM |
0 |
0 |
2 |
0 |
0 |
0 |
3 (1) c |
" |
EspN |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
" |
EspO |
1 (1) |
0 |
2 |
0 |
0 |
0 |
0 |
" |
EspV |
0 |
0 |
1 (1) |
0 |
0 |
0 |
1 (1) |
" |
EspW |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
" |
EspX |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
" |
EspZ |
1 |
0 |
1 |
0 |
0 |
0 |
1 |
" |
Map |
1 |
0 |
1 |
0 |
0 |
0 |
1 |
" |
NleA/EspI |
1 |
0 |
1 |
0 |
0 |
0 |
1 |
" |
NleB |
3 (1) |
0 |
3 (1) |
0 |
0 |
0 |
3 (2) |
" |
NleC |
1 |
0 |
1 |
0 |
0 |
0 |
2 (2) |
" |
NleD |
1 |
0 |
1 |
0 |
0 |
0 |
0 |
" |
NleE |
2 |
0 |
1 |
0 |
0 |
0 |
1 |
" |
NleF |
1 |
0 |
1 |
0 |
0 |
0 |
1 |
" |
NleG |
1 |
0 |
14 (5) |
0 |
0 |
0 |
6 |
" |
NleH |
3 (1) |
0 |
2 |
0 |
0 |
0 |
2 (1) |
" |
TccP |
0 |
0 |
2 (1) |
0 |
0 |
0 |
1 |
" |
Tir |
1 |
0 |
1 |
0 |
0 |
0 |
1 |
" |
Cif |
1 (1) |
0 |
0 |
0 |
0 |
0 |
1 |
" |
OspB |
0 |
0 |
0 |
0 |
0 |
0 |
2 (1) |
" |
EspL |
1 (1) |
1 (1) |
3 (1) |
2 (1) |
2 (2) |
2 (2) |
2 (2) |
Effectors at other loci |
EspR |
0 |
0 |
4 (1) |
2 (2) |
1 |
1 |
1 (1) |
" |
EspX |
0 |
0 |
6 (1) |
2 (1) |
3 (3) |
3 (1) |
3 (1) |
" |
EspY |
0 |
0 |
5 (1) |
1 (1) |
0 |
0 |
0 |
" |
Total |
27 (6) |
1 (1) |
62 (12) |
7 (5) |
6 (5) |
6 (3) |
=40 (12) |
" |
a p, partial.
b The numbers in parentheses are the numbers of pseudogenes.
c Includes one plasmid-encoded homologue.
