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2014 (62 papers)

Chaturvedi S, Kalantidis K, Rao AL. (2014) A bromodomain-containing host protein mediates the nuclear importation of a satellite RNA of Cucumber mosaic virus. J Virol. 88:1890-1896.
[Abstract]
Konstantinides N, Averof M. (2014) A common cellular basis for muscle regeneration in arthropods and vertebrates. Science. 343:788-791.
[Abstract]
Petrantonakis PC, Poirazi P. (2014) A compressed sensing perspective of hippocampal function. Front Syst Neurosci. 8:141.
[Abstract]
Karvounis EC, Tsipouras MG, Tzallas AT, Katertsidis NS, Stefanou K, Goletsis Y, Frigerio M, Verde A, Caruso R, Meyns B, Terrovitis J, Trivella MG, Fotiadis DI. (2014) A decision support system for the treatment of patients with ventricular assist device support. Methods Inf Med. 53:121-36.
[Abstract]
Papadopoulos VE, Kefala IN, Kaprou G, Kokkoris G, Moschou D, Papadakis G, Gizeli E, Tserepi A. (2014) A passive micromixer for enzymatic digestion of DNA. Microelectronic Engineering. 124:42-46.
[Abstract]
Psarrou M, Stefanou SS, Papoutsi A, Tzilivaki A, Cutsuridis V, Poirazi P. (2014) A simulation study on the effects of dendritic morphology on layer V prefrontal pyramidal cell firing behavior. Front Cell Neurosci. 8:287.
[Abstract]
Rao C V S, De Waelheyns E, Economou A, Anné J. (2014) Antibiotic targeting of the bacterial secretory pathway. Biochim Biophys Acta. 1843:1762-1783.
[Abstract]
Bellos CC, Papadopoulos A, Rosso R, Fotiadis DI. (2014) Identification of COPD patients' health status using an intelligent system in the CHRONIOUS wearable platform. IEEE J Biomed Health Inform. 18:731-738.
[Abstract]
Papanikolaou N, Pavlopoulos GA, Pafilis E, Theodosiou T, Schneider R, Satagopam VP, Ouzounis CA, Eliopoulos AG, Promponas VJ, Iliopoulos I. (2014) BioTextQuest(+): a knowledge integration platform for literature mining and concept discovery. Bioinformatics. 30:3249-3256.
[Abstract]
Tsikala G, Karagogeos D, Strigini M. (2014) Btk-dependent epithelial cell rearrangements contribute to the invagination of nearby tubular structures in the posterior spiracles of Drosophila. Dev Biol. 396:42-56.
[Abstract]
Kyriakakis E, Markaki M, Tavernarakis N. (2014) Caenorhabditis elegans as a model for cancer research. Mol Cell Oncol. 2:e975027.
[Abstract]
Nikoletopoulou V, Kyriakakis E, Tavernarakis N. (2014) Cellular and molecular longevity pathways: the old and the new. Trends Endocrinol Metab. 25:212-223.
[Abstract]
Pantazis A.K, Konstantinidis G, Gizeli E. (2014) Characterization of a GaN Lamb-Wave Sensor for Liquid-Based Mass Sensing Applications. IEEE Sensors Journal. 14:908-911.
[Abstract]
Papoutsi A, Kastellakis G, Psarrou M, Anastasakis S, Poirazi P. (2014) Coding and decoding with dendrites. J Physiol Paris. 108:18-27.
[Abstract]
Kallergi E, Kalef-Ezra E, Karagouni-Dalakoura K, Tokatlidis K. (2014) Common players in mitochondria biogenesis and neuronal protection against stress-induced apoptosis. Neurochem Res. 39:546-555.
[Abstract]
Kougioumtzi A, Tsaparas P, Magklara A. (2014) Deep sequencing reveals new aspects of progesterone receptor signaling in breast cancer cells. PLoS One. 9:e98404.
[Abstract]
Papoutsi A, Sidiropoulou K, Poirazi P. (2014) Dendritic Nonlinearities Reduce Network Size Requirements and Mediate ON and OFF States of Persistent Activity in a PFC Microcircuit Model. PLoS Comput Biol. 10:e1003764.
[Abstract]
Chatzinikolaou G, Karakasilioti I, Garinis GA. (2014) DNA damage and innate immunity: links and trade-offs. Trends Immunol. 35:429-435.
[Abrstract]
Karathanasis N, Tsamardinos I, Poirazi P. (2014) Don't use a cannon to kill the ... miRNA mosquito. Bioinformatics. 30:1047-1048.
[Abstract]
Galluzzi L, Bravo-San Pedro JM, Vitale I, Aaronson SA, Abrams JM, Adam D, Alnemri ES, Altucci L, Andrews D, Annicchiarico-Petruzzelli M, Baehrecke EH, Bazan NG, Bertrand MJ, Bianchi K, Blagosklonny MV, Blomgren K, Borner C, Bredesen DE, Brenner C, Campanella M, Candi E, Cecconi F, Chan FK, Chandel NS, Cheng EH, Chipuk JE, Cidlowski JA, Ciechanover A, Dawson TM, Dawson VL, De Laurenzi V, De Maria R, Debatin KM, Di Daniele N, Dixit VM, Dynlacht BD, El-Deiry WS, Fimia GM, Flavell RA, Fulda S, Garrido C, Gougeon ML, Green DR, Gronemeyer H, Hajnoczky G, Hardwick JM, Hengartner MO, Ichijo H, Joseph B, Jost PJ, Kaufmann T, Kepp O, Klionsky DJ, Knight RA, Kumar S, Lemasters JJ, Levine B, Linkermann A, Lipton SA, Lockshin RA, López-Otín C, Lugli E, Madeo F, Malorni W, Marine JC, Martin SJ, Martinou JC, Medema JP, Meier P, Melino S, Mizushima N, Moll U, Muñoz-Pinedo C, Nuñez G, Oberst A, Panaretakis T, Penninger JM, Peter ME, Piacentini M, Pinton P, Prehn JH, Puthalakath H, Rabinovich GA, Ravichandran KS, Rizzuto R, Rodrigues CM, Rubinsztein DC, Rudel T, Shi Y, Simon HU, Stockwell BR, Szabadkai G, Tait SW, Tang HL, Tavernarakis N, Tsujimoto Y, Vanden Berghe T, Vandenabeele P, Villunger A, Wagner EF, Walczak H, White E, Wood WG, Yuan J, Zakeri Z, Zhivotovsky B, Melino G, Kroemer G. (2014) Essential versus accessory aspects of cell death: recommendations of the NCCD 2015. Cell Death Differ. 22:58-73.
[Abstract]
Goulielmaki E, Sidén-Kiamos I, Loukeris TG. (2014) Functional Characterization of Anopheles Matrix Metalloprotease 1 Reveals Its Agonistic Role during Sporogonic Development of Malaria Parasites. Infect Immun. 82:4865-4877.
[Abstract]
Andreadaki M, Morgan RN, Deligianni E, Kooij TW, Santos JM, Spanos L, Matuschewski K, Louis C, Mair GR, Siden-Kiamos I. (2014) Genetic crosses and complementation reveal essential functions for the Plasmodium stage-specific actin2 in sporogonic development. Cell Microbiol. 16:751-767.
[Abstract]
Delidakis C, Monastirioti M, Magadi SS. (2014) E(spl): genetic, developmental, and evolutionary aspects of a group of invertebrate Hes proteins with close ties to Notch signaling. Curr Top Dev Biol. 110:217-262.
[Abstract]
Ho VM, Dallalzadeh LO, Karathanasis N, Keles MF, Vangala S, Grogan T, Poirazi P, Martin KC. (2014) GluA2 mRNA distribution and regulation by miR-124 in hippocampal neurons. Mol Cell Neurosci. 61:1-12.
[Abstract]
Hall LL, Carone DM, Gomez AV, Kolpa HJ, Byron M, Mehta N, Fackelmayer FO, Lawrence JB. (2014) Stable C0T-1 repeat RNA is abundant and is associated with euchromatic interphase chromosomes. Cell. 156:907-19.
[Abstract]
Lyons DB, Magklara A, Goh T, Sampath SC, Schaefer A, Schotta G, Lomvardas S. (2014) Heterochromatin-mediated gene silencing facilitates the diversification of olfactory neurons. Cell Rep. 9:884-892.
[Abstract]
Bellos CC, Papadopoulos A, Rosso R, Fotiadis DI. (2014) Identification of COPD patients' health status using an intelligent system in the CHRONIOUS wearable platform. IEEE J Biomed Health Inform. 18:731-738.
[Abstract]
Gkeka P, Evangelidis T, Pavlaki M, Lazani V, Christoforidis S, Agianian B, Cournia Z. (2014) Investigating the structure and dynamics of the PIK3CA wild-type and H1047R oncogenic mutant. PLoS Comput Biol. 10:e1003895.
[Abstract]
Tserevelakis GJ, Megalou EV, Filippidis G, Petanidou B, Fotakis C, Tavernarakis N. (2014) Label-free imaging of lipid depositions in C. elegans using third-harmonic generation microscopy. PLoS One. 9:e84431.
[Abstract]
Liljenfeldt L, Gkirtzimanaki K, Vyrla D, Svensson E, Loskog AS, Eliopoulos AG. (2014) Enhanced therapeutic anti-tumor immunity induced by co-administration of 5-fluorouracil and adenovirus expressing CD40 ligand. Cancer Immunol Immunother. 63:273-282.
[Abstract]
Gkikas I, Petratou D, Tavernarakis N. (2014) Longevity pathways and memory aging. Front Genet. 5:155.
[Abstract]
Kourou K, Exarchos TP, Exarchos KP, Karamouzis MV, Fotiadis DI. (2014) Machine learning applications in cancer prognosis and prediction. Comput Struct Biotechnol J. 13:8-17.
[Abstract]
Athanasiou LS, Bourantas CV, Rigas G, Sakellarios AI, Exarchos TP, Siogkas PK, Ricciardi A, Naka KK, Papafaklis MI, Michalis LK, Prati F, Fotiadis DI. (2014) Methodology for fully automated segmentation and plaque characterization in intracoronary optical coherence tomography images. J Biomed Opt. 19:026009.
[Abstract]
Nikoletopoulou V, Tavernarakis N. (2014) Mitochondrial biogenesis and dynamics in neurodegeneration: a causative relationship. Neurochem Res. 39:542-545.
[Abstract]
Palikaras K, Tavernarakis N. (2014) Mitochondrial homeostasis: the interplay between mitophagy and mitochondrial biogenesis. Exp Gerontol. 56:182-188.
[Abstract]
Tzallas AT, Katertsidis NS, Karvounis EC, Tsipouras MG, Rigas G, Goletsis Y, Zielinski K, Fresiello L, Molfetta AD, Ferrari G, Terrovitis JV, Trivella MG, Fotiadis DI. (2014) Modeling and simulation of speed selection on left ventricular assist devices. Comput Biol Med. 51:128-39.
[Abstract]
Konstantoudaki X, Papoutsi A, Chalkiadaki K, Poirazi P, Sidiropoulou K. (2014) Modulatory effects of inhibition on persistent activity in a cortical microcircuit model. Front Neural Circuits. 8:7.
[Abstract]
Nikoletopoulou V, Tavernarakis N. (2014) Necrotic cell death in Caenorhabditis elegans. Methods Enzymol. 545:127-155.
[Abstract]
Dritsou V, Deligianni E, Dialynas E, Allen J, Poulakakis N, Louis C, Lawson D, Topalis P. (2014) Non-coding RNA gene families in the genomes of anopheline mosquitoes. BMC Genomics. 15:1038.
[Abstract]
Sfakianakis S, Bei ES, Zervakis M, Vassou D, Kafetzopoulos D. (2014) On the identification of circulating tumor cells in breast cancer. IEEE J Biomed Health Inform. 18:773-782.
[Abstract]
Vlachopanos A, Soupsana E, Politou AS, Papamokos GV. (2014) POTAMOS mass spectrometry calculator: computer aided mass spectrometry to the post-translational modifications of proteins. A focus on histones. Biol Med. 55:36-41.
[Abstract]
Suchánková J, Legartová S, Sehnalová P, Kozubek S, Valente S, Labella D, Mai A, Eckerich C, Fackelmayer FO, Sorokin DV, Bartova E. (2014) PRMT1 arginine methyltransferase accumulates in cytoplasmic bodies that respond to selective inhibition and DNA damage. Eur J Histochem. 58:2389.
[Abstract]
Orfanoudaki G, Economou A. (2014) Proteome-wide subcellular topologies of E. coli polypeptides database (STEPdb). Mol Cell Proteomics. 13:3674-3687.
[Abstract]
Mitsakakis K, Tsortos A, Gizeli E. (2014) Quantitative determination of protein molecular weight with an acoustic sensor; significance of specific versus non-specific binding. Analyst. 139:3918-3925.
[Abstract ]
Andreadis C, Nikolaou C, Fragiadakis GS, Tsiliki G, Alexandraki D. (2014) Rad9 interacts with Aft1 to facilitate genome surveillance in fragile genomic sites under non-DNA damage-inducing conditions in S. cerevisiae. Nucleic Acids Res. 42:12650-12667.
[Abstract]
Kostaras E, Pedersen NM, Stenmark H, Fotsis T, Murphy C. (2014) SARA and RNF11 at the crossroads of EGFR signaling and trafficking. Methods Enzymol. 535:225-247.
[Abstract]
Papadakis G, Gizeli E. (2014) Screening for mutations in BRCA1 and BRCA2 genes by measuring the acoustic ratio with QCM. Anal. Methods. 6:363-371.
[Abstract]
Chatzi KE, Sardis MF, Economou A, Karamanou S. (2014) SecA-mediated targeting and translocation of secretory proteins. Biochim Biophys Acta. 1843:1466-1474.
[Abstract]
Büttner S, Broeskamp F, Sommer C, Markaki M, Habernig L, Alavian-Ghavanini A, Carmona-Gutierrez D, Eisenberg T, Michael E, Kroemer G, Tavernarakis N, Sigrist SJ, Madeo F. (2014) Spermidine protects against α-synuclein neurotoxicity. Cell Cycle. 13:3903-3908
[Abstract]
Balocco S, Gatta C, Ciompi F, Wahle A, Radeva P, Carlier S, Unal G, Sanidas E, Mauri J, Carillo X, Kovarnik T, Wang CW, Chen HC, Exarchos TP, Fotiadis DI, Destrempes F, Cloutier G, Pujol O, Alberti M, Mendizabal-Ruiz EG, Rivera M, Aksoy T, Downe RW, Kakadiaris IA. (2014) Standardized evaluation methodology and reference database for evaluating IVUS image segmentation. Comput Med Imaging Graph. 38:70-90.
[Abstract]
Saio T, Guan X, Rossi P, Economou A, Kalodimos CG. (2014) Structural basis for protein antiaggregation activity of the trigger factor chaperone. Science. 344:1250494.
[Abstract]
Vahokoski J, Bhargav SP, Desfosses A, Andreadaki M, Kumpula EP, Martinez SM, Ignatev A, Lepper S, Frischknecht F, Sidén-Kiamos I, Sachse C, Kursula I. (2014) Structural differences explain diverse functions of Plasmodium actins. PLoS Pathog. 10:e1004091.
[Abstract]
Amprazi M, Kotsifaki D, Providaki M, Kapetaniou EG, Fellas G, Kyriazidis I, Pérez J, Kokkinidis M. (2014) Structural plasticity of 4-α-helical bundles exemplified by the puzzle-like molecular assembly of the Rop protein. Proc Natl Acad Sci U S A. 111:11049-11054.
[Abstract]
Schmidt ER, Brignani S, Adolfs Y, Lemstra S, Demmers J, Vidaki M, Donahoo AL, Lilleväli K, Vasar E, Richards LJ, Karagogeos D, Kolk SM, Pasterkamp RJ. (2014) Subdomain-mediated axon-axon signaling and chemoattraction cooperate to regulate afferent innervation of the lateral habenula. Neuron. 83:372-387.
[Abstract]
Delidakis C. (2014) Tempering temperature changes for robust development. Cell. 157:1010-1012.
[Abstract]
Gessmann R, Brückner H, Petratos K. (2014) The achiral tetrapeptide Z-Aib-Aib-Aib-Gly-OtBu. Acta Crystallogr C Struct Chem. 70:1046-1049
[Abstract]
Kapsetaki SE, Tzelepis I, Avgousti K, Livadaras I, Garantonakis N, Varikou K, Apidianakis Y. (2014) The bacterial metabolite 2-aminoacetophenone promotes association of pathogenic bacteria with flies. Nat Commun. 5:4401.
[Abstract]
Barrier E, Braz Fernandes FM, Bujan M, Feiters MC, Froideval A, Ghijsen J, Hase T, Hough MA, Jergel M, Jimenez I, Kajander T, Kikas A, Kokkinidis M, Kover L, Larsen HB, Lawson DM, Lawniczak-Jablonska K, Mariani C, Mikulik P, Monnier J, Morera S, McGuinness C, Müller-Buschbaum P, Meedom Nielson M, Pietsch U, Tromp M, Simon M, Stangl J, Zanotti G. (2014) The benefit of the European User Community from transnational access to national radiation facilities. J Synchrotron Radiat. 21:638-639.
[Abstract]
Gkouskou KK, Deligianni C, Tsatsanis C, Eliopoulos AG. (2014) The gut microbiota in mouse models of inflammatory bowel disease. Front Cell Infect Microbiol. 4:28.
[Abstract]
Kypri E, Christodoulou A, Maimaris G, Lethan M, Markaki M, Lysandrou C, Lederer CW, Tavernarakis N, Geimer S, Pedersen LB, Santama N. (2014) The nucleotide-binding proteins Nubp1 and Nubp2 are negative regulators of ciliogenesis. Cell Mol Life Sci. 71:517-538.
[Abstract]
Gessmann R, Brückner H, Petratos K. (2014) The peptide Z-Aib-Aib-Aib-L-Ala-OtBu. Acta Crystallogr C Struct Chem. 70:405-407.
[Abstract]
Karakasilioti I, Garinis GA. (2014) Tissue-specific aging: a tale of functional asymmetry. Aging (Albany NY). 6:7-8.
[Abstract]
Karali E, Bellou S, Stellas D, Klinakis A, Murphy C, Fotsis T. (2014) VEGF signaling, mTOR complexes, and the endoplasmic reticulum: Towards a role of metabolic sensing in the regulation of angiogenesis. Mol Cell Oncol. 1:e964024.
[Abstract]
Karali E, Bellou S, Stellas D, Klinakis A, Murphy C, Fotsis T. (2014) VEGF Signals through ATF6 and PERK to promote endothelial cell survival and angiogenesis in the absence of ER stress. Mol Cell. 54:559-572.
[Abstract]

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