Top Publications 1986 - 2024 (165 papers)
SELECTED HIGH IMPACT PRIMARY PUBLICATIONS FROM TOP SCIENTIFIC JOURNALS
(The list contains only primary research performed mainly in IMBB labs, with first/co-first and corresponding/co-corresponding authors from IMBB)
Galanopoulou O, Tachmatzidi EC, Deligianni E, Botskaris D, Nikolaou KC, Gargani S, Dalezios Y, Chalepakis G, Talianidis I. (2024) Endonucleosis mediates internalization of cytoplasm into the nucleus. Nat Commun. 15:5843.
[Abstract]
Varveri A, Papadopoulou M, Papadovasilakis Z, Compeer EB, Legaki AI, Delis A, Damaskou V, Boon L, Papadogiorgaki S, Samiotaki M, Foukas PG, Eliopoulos AG, Hatzioannou A, Alissafi T, Dustin ML, Verginis P. (2024) Immunological synapse formation between T regulatory cells and cancer-associated fibroblasts promotes tumour development. Nat Commun. 15:4988.
[Abstract]
Siametis A, Stratigi K, Giamaki D, Chatzinikolaou G, Akalestou-Clocher A, Goulielmaki E, Luke B, Schumacher B, Garinis GA. (2024) Transcription stress at telomeres leads to cytosolic DNA release and paracrine senescence. Nat Commun. 15:4061.
[Abstract]
Arvanitaki ES, Goulielmaki E, Gkirtzimanaki K, Niotis G, Tsakani E, Nenedaki E, Rouska I, Kefalogianni M, Xydias D, Kalafatakis I, Psilodimitrakopoulos S, Karagogeos D, Schumacher B, Stratakis E, Garinis GA. (2024) Microglia-derived extracellular vesicles trigger age-related neurodegeneration upon DNA damage. Proc Natl Acad Sci U S A. 121:e2317402121.
[Abstract]
Veneti Z, Fasoulaki V, Kalavros N, Vlachos IS, Delidakis C, Eliopoulos AG. (2024) Polycomb-mediated silencing of miR-8 is required for maintenance of intestinal stemness in Drosophila melanogaster. Nat Commun. 15:1924.
[Abstract]
Vergadi E, Kolliniati O, Lapi I, Ieronymaki E, Lyroni K, Alexaki VI, Diamantaki E, Vaporidi K, Hatzidaki E, Papadaki HA, Galanakis E, Hajishengallis G, Chavakis T, Tsatsanis C. (2024) An IL-10/DEL-1 axis supports granulopoiesis and survival from sepsis in early life. Nat Commun. 15:680.
[Abstract]
Chatzinikolaou G, Stratigi K, Siametis A, Goulielmaki E, Akalestou-Clocher A, Tsamardinos I, Topalis P, Austin C, Bouwman BAM, Crosetto N, Altmüller J, Garinis GA. (2023) XPF interacts with TOP2B for R-loop processing and DNA looping on actively transcribed genes. Sci Adv. 9:eadi2095.
[Abstract]
Tzilivaki A, Tukker JJ, Maier N, Poirazi P, Sammons RP, Schmitz D. (2023) Hippocampal GABAergic interneurons and memory. Neuron. 111:3154-3175.
[Abstract]
Ntini E, Budach S, Vang Ørom UA, Marsico A. (2023) Genome-wide measurement of RNA dissociation from chromatin classifies transcripts by their dynamics and reveals rapid dissociation of enhancer lncRNAs. Cell Syst. 14:906-922.
[Abstract]
Voutyraki C, Choromidis A, Meligkounaki A, Vlachopoulos NA, Theodorou V, Grammenoudi S, Athanasiadis E, Monticelli S, Giangrande A, Delidakis C, Zacharioudaki E. (2023) Growth deregulation and interaction with host hemocytes contribute to tumor progression in a Drosophila brain tumor model. Proc Natl Acad Sci U S A. 120:e2221601120.
[Abstract]
Daskalaki I, Markaki M, Gkikas I, Tavernarakis N. (2023) Local coordination of mRNA storage and degradation near mitochondria modulates C. elegans ageing. EMBO J. 42:e112446.
[Abstract]
Pagkalos M, Chavlis S, Poirazi P. (2023) Introducing the Dendrify framework for incorporating dendrites to spiking neural networks. Nat Commun. 14:131.
[Abstract]
Papandreou ME, Konstantinidis G, Tavernarakis N. (2023) Nucleophagy delays aging and preserves germline immortality. Nat Aging. 3:34-46.
[Abstract]
Zelenka T, Klonizakis A, Tsoukatou D, Papamatheakis DA, Franzenburg S, Tzerpos P, Tzonevrakis IR, Papadogkonas G, Kapsetaki M, Nikolaou C, Plewczynski D, Spilianakis C. (2022) The 3D enhancer network of the developing T cell genome is shaped by SATB1. Nat Commun. 13:6954.
[Abstract]
Michalopoulou VA, Mermigka G, Kotsaridis K, Mentzelopoulou A, Celie PHN, Moschou PN, Jones JDG, Sarris PF. (2022) The host exocyst complex is targeted by a conserved bacterial type-III effector that promotes virulence. Plant Cell. 34:3400-3424.
[Abstract]
Naoumi N, Michaelidou K, Papadakis G, Simaiaki AE, Fernández R, Calero M, Arnau A, Tsortos A, Agelaki S, Gizeli E. (2022) Acoustic Array Biochip Combined with Allele-Specific PCR for Multiple Cancer Mutation Analysis in Tissue and Liquid Biopsy. ACS Sens. 7:495-503.
[Abstract]
Lionaki E, Gkikas I, Daskalaki I, Ioannidi MK, Klapa MI, Tavernarakis N. (2022) Mitochondrial protein import determines lifespan through metabolic reprogramming and de novo serine biosynthesis. Nat Commun. 13:651.
[Abstract]
Gouridis G, Muthahari YA, de Boer M, Griffith DA, Tsirigotaki A, Tassis K, Zijlstra N, Xu R, Eleftheriadis N, Sugijo Y, Zacharias M, Dömling A, Karamanou S, Pozidis C, Economou A, Cordes T. (2021) Structural dynamics in the evolution of a bilobed protein scaffold. Proc Natl Acad Sci U S A. 118:e2026165118.
[Abstract]
Chatzidoukaki O, Stratigi K, Goulielmaki E, Niotis G, Akalestou-Clocher A, Gkirtzimanaki K, Zafeiropoulos A, Altmüller J, Topalis P, Garinis GA. (2021) R-loops trigger the release of cytoplasmic ssDNAs leading to chronic inflammation upon DNA damage. Sci Adv. 7:eabj5769.
[Abstract]
Georgakis S, Gkirtzimanaki K, Papadaki G, Gakiopoulou H, Drakos E, Eloranta ML, Makridakis M, Kontostathi G, Zoidakis J, Baira E, Rönnblom L, Boumpas DT, Sidiropoulos P, Verginis P, Bertsias G. (2021) NETs decorated with bioactive IL-33 infiltrate inflamed tissues and induce IFN-α production in patients with SLE. JCI Insight. 6:e147671.
[Abstract]
Krishnamurthy S, Eleftheriadis N, Karathanou K, Smit JH, Portaliou AG, Chatzi KE, Karamanou S, Bondar AN, Gouridis G, Economou A. (2021) A nexus of intrinsic dynamics underlies translocase priming. Structure. 29:846-858.
[Abstract]
SenGupta T, Palikaras K, Esbensen YQ, Konstantinidis G, Galindo FJN, Achanta K, Kassahun H, Stavgiannoudaki I, Bohr VA, Akbari M, Gaare J, Tzoulis C, Tavernarakis N, Nilsen H. (2021) Base excision repair causes age-dependent accumulation of single-stranded DNA breaks that contribute to Parkinson disease pathology. Cell Rep. 36:109668.
[Abstract]
Akoumianaki T, Vaporidi K, Diamantaki E, Pène F, Beau R, Gresnigt MS, Gkountzinopulou M, Venichaki M, Drakos E, El-Benna J, Samonis G, Le KTT, Kumar V, Georgopoulos D, van de Veerdonk FL, Netea MG, Latge JP, Chamilos G. (2021) Uncoupling of IL-6 signaling and LC3-associated phagocytosis drives immunoparalysis during sepsis. Cell Host Microbe. 29:1277-1293.
[Abstract]
Goulielmaki E, Tsekrekou M, Batsiotos N, Ascensão-Ferreira M, Ledaki E, Stratigi K, Chatzinikolaou G, Topalis P, Kosteas T, Altmüller J, Demmers JA, Barbosa-Morais NL, Garinis GA. (2021) The splicing factor XAB2 interacts with ERCC1-XPF and XPG for R-loop processing. Nat Commun. 12:3153
[Abstract]
Adamichou C, Genitsaridi I, Nikolopoulos D, Nikoloudaki M, Repa A, Bortoluzzi A, Fanouriakis A, Sidiropoulos P, Boumpas DT, Bertsias GK. (2021) Lupus or not? SLE Risk Probability Index (SLERPI): a simple, clinician-friendly machine learning-based model to assist the diagnosis of systemic lupus erythematosus. Ann Rheum Dis. 80:758-766.
[Abstract]
Vlogiannitis S, Mavridis K, Dermauw W, Snoeck S, Katsavou E, Morou E, Harizanis P, Swevers L, Hemingway J, Feyereisen R, Van Leeuwen T, Vontas J. (2021) Reduced proinsecticide activation by cytochrome P450 confers coumaphos resistance in the major bee parasite Varroa destructor. Proc Natl Acad Sci U S A. 118:e2020380118.
[Abstract]
Magadi SS, Voutyraki C, Anagnostopoulos G, Zacharioudaki E, Poutakidou IK, Efraimoglou C, Stapountzi M, Theodorou V, Nikolaou C, Koumbanakis KA, Fullard JF, Delidakis C. (2020) Dissecting Hes-centred transcriptional networks in neural stem cell maintenance and tumorigenesis in Drosophila. Development. 147:dev191544.
[Abstract]
Jain A, Ulman V, Mukherjee A, Prakash M, Cuenca MB, Pimpale LG, Münster S, Haase R, Panfilio KA, Jug F, Grill SW, Tomancak P, Pavlopoulos A. (2020) Regionalized tissue fluidization is required for epithelial gap closure during insect gastrulation. Nat Commun. 11:5604.
[Abstract]
Kourgiantaki A, Tzeranis DS, Karali K, Georgelou K, Bampoula E, Psilodimitrakopoulos S, Yannas IV, Stratakis E, Sidiropoulou K, Charalampopoulos I, Gravanis A. (2020) Neural Stem Cell Delivery via Porous Collagen Scaffolds Promotes Neuronal Differentiation and Locomotion Recovery in Spinal Cord Injury. NPJ Regen Med. 5:12.
[Abstract]
Karagianni P, Moulos P, Schmidt D, Odom DT, Talianidis I. (2020) Bookmarking by Non-pioneer Transcription Factors during Liver Development Establishes Competence for Future Gene Activation. Cell Rep. 30:1319-1328.e6.
[Abstract]
Shuman T, Aharoni D, Cai DJ, Lee CR, Chavlis S, Page-Harley L, Vetere LM, Feng Y, Yang CY, Mollinedo-Gajate I, Chen L, Pennington ZT, Taxidis J, Flores SE, Cheng K, Javaherian M, Kaba CC, Rao N, La-Vu M, Pandi I, Shtrahman M, Bakhurin KI, Masmanidis SC, Khakh BS, Poirazi P, Silva AJ, Golshani P. (2020) Breakdown of spatial coding and interneuron synchronization in epileptic mice. Nat Neurosci. 23:229-238.
[Abstract]
Goulielmaki E, Ioannidou A, Tsekrekou M, Stratigi K, Poutakidou IK, Gkirtzimanaki K, Aivaliotis M, Evangelou K, Topalis P, Altmüller J, Gorgoulis VG, Chatzinikolaou G, Garinis GA. (2020) Tissue-infiltrating macrophages mediate an exosome-based metabolic reprogramming upon DNA damage. Nat Commun. 11:42.
[Abstract]
Park J, Papoutsi A, Ash RT, Marin MA, Poirazi P, Smirnakis SM. (2019) Contribution of apical and basal dendrites to orientation encoding in mouse V1 L2/3 pyramidal neurons. Nat Commun. 10:5372.
[Abstract]
Tzilivaki A, Kastellakis G, Poirazi P. (2019) Challenging the point neuron dogma: FS basket cells as 2-stage nonlinear integrators. Nat Commun. 10:3664.
[Abstract]
Turi GF, Li WK, Chavlis S, Pandi I, O'Hare J, Priestley JB, Grosmark AD, Liao Z, Ladow M, Zhang JF, Zemelman BV, Poirazi P, Losonczy A. (2019) Vasoactive Intestinal Polypeptide-Expressing Interneurons in the Hippocampus Support Goal-Oriented Spatial Learning. Neuron. 101:1150-1165.
[Abstract]
Fang EF, Hou Y, Palikaras K, Adriaanse BA, Kerr JS, Yang B, Lautrup S, Hasan-Olive MM, Caponio D, Dan X, Rocktäschel P, Croteau DL, Akbari M, Greig NH, Fladby T, Nilsen H, Cader MZ, Mattson MP, Tavernarakis N, Bohr VA. (2019) Mitophagy inhibits amyloid-β and tau pathology and reverses cognitive deficits in models of Alzheimer's disease. Nat Neurosci. 22:401-412.
[Abstract]
Rieckher M, Markaki M, Princz A, Schumacher B, Tavernarakis N. (2018) Maintenance of Proteostasis by P Body-Mediated Regulation of eIF4E Availability during Aging in Caenorhabditis elegans. Cell Rep. 25:199-211.e6.
[Abstract]
Andrianaki AM, Kyrmizi I, Thanopoulou K, Baldin C, Drakos E, Soliman SSM, Shetty AC, McCracken C, Akoumianaki T, Stylianou K, Ioannou P, Pontikoglou C, Papadaki HA, Tzardi M, Belle V, Ettiene E, Beauvais A, Samonis G, Kontoyiannis DP, Andreakos E, Bruno VM, Ibrahim AS, Chamilos G. (2018) Iron restriction inside macrophages regulates pulmonary host defense against Rhizopus species. Nat Commun. 9:3333.
[Abstract]
Kyrmizi I, Ferreira H, Carvalho A, Figueroa JAL, Zarmpas P, Cunha C, Akoumianaki T, Stylianou K, Deepe GS Jr, Samonis G, Lacerda JF, Campos A Jr, Kontoyiannis DP, Mihalopoulos N, Kwon-Chung KJ, El-Benna J, Valsecchi I, Beauvais A, Brakhage AA, Neves NM, Latge JP, Chamilos G. (2018) Calcium sequestration by fungal melanin inhibits calcium-calmodulin signalling to prevent LC3-associated phagocytosis. Nat Microbiol. 3:791-803.
[Abstract]
Vontas J, Grigoraki L, Morgan J, Tsakireli D, Fuseini G, Segura L, Niemczura de Carvalho J, Nguema R, Weetman D, Slotman MA, Hemingway J. (2018) Rapid selection of a pyrethroid metabolic enzyme CYP9K1 by operational malaria control activities. Proc Natl Acad Sci U S A. 115:4619-4624.
[Abstract]
Pietrocola F, Castoldi F, Markaki M, Lachkar S, Chen G, Enot DP, Durand S, Bossut N, Tong M, Malik SA, Loos F, Dupont N, Mariño G, Abdelkader N, Madeo F, Maiuri MC, Kroemer R, Codogno P, Sadoshima J, Tavernarakis N, Kroemer G. (2018) Aspirin Recapitulates Features of Caloric Restriction. Cell Rep. 22:2395-2407.
[Abstract]
Frank AC, Huang S, Zhou M, Gdalyahu A, Kastellakis G, Silva TK, Lu E, Wen X, Poirazi P, Trachtenberg JT, Silva AJ. (2018) Hotspots of dendritic spine turnover facilitate clustered spine addition and learning and memory. Nat Commun. 9:422.
[Abstract]
Nikolaou KC, Moulos P, Harokopos V, Chalepakis G, Talianidis I. (2017) Kmt5a Controls Hepatic Metabolic Pathways by Facilitating RNA Pol II Release from Promoter-Proximal Regions. Cell Rep. 20:909-922.
[Abstract]
Nikoletopoulou V, Sidiropoulou K, Kallergi E, Dalezios Y, Tavernarakis N. (2017) Modulation of Autophagy by BDNF Underlies Synaptic Plasticity. Cell Metab. 26:230-242.
[Abstract]
Chatzinikolaou G, Apostolou Z, Aid-Pavlidis T, Ioannidou A, Karakasilioti I, Papadopoulos GL, Aivaliotis M, Tsekrekou M, Strouboulis J, Kosteas T, Garinis GA. (2017) ERCC1-XPF cooperates with CTCF and cohesin to facilitate the developmental silencing of imprinted genes. Nat Cell Biol. 19:421-432.
[Abstract]
Chatzi KE, Sardis MF, Tsirigotaki A, Koukaki M, Šoštarić N, Konijnenberg A, Sobott F, Kalodimos CG, Karamanou S, Economou A. (2017) Preprotein mature domains contain translocase targeting signals that are essential for secretion. J Cell Biol. 216:1357-1369.
[Abstract]
Fadouloglou VE, Balomenou S, Aivaliotis M, Kotsifaki D, Arnaouteli S, Tomatsidou A, Efstathiou G, Kountourakis N, Miliara S, Griniezaki M, Tsalafouta A, Pergantis SA, Boneca IG, Glykos NM, Bouriotis V, Kokkinidis M. (2017) Unusual α-Carbon Hydroxylation of Proline Promotes Active-Site Maturation. J Am Chem Soc. 139:5330-5337.
[Abstract]
Douris V, Steinbach D, Panteleri R, Livadaras I, Pickett JA, Van Leeuwen T, Nauen R, Vontas J. (2016) Resistance mutation conserved between insects and mites unravels the benzoylurea insecticide mode of action on chitin biosynthesis. Proc Natl Acad Sci U S A. 113:14692-14697.
[Abstract]
Currà C, Gessmann R, Pace T, Picci L, Peruzzi G, Varamogianni-Mamatsi V, Spanos L, Garcia CR, Spaccapelo R, Ponzi M, Siden-Kiamos I. (2016) Release of Plasmodium sporozoites requires proteins with histone-fold dimerization domains. Nat Commun. 7:13846.
[Abstract]
Kastellakis G, Silva AJ, Poirazi P. (2016) Linking Memories across Time via Neuronal and Dendritic Overlaps in Model Neurons with Active Dendrites. Cell Rep. 17:1491-1504.
[Abstract]
Balabanidou V, Kampouraki A, MacLean M, Blomquist GJ, Tittiger C, Juárez MP, Mijailovsky SJ, Chalepakis G, Anthousi A, Lynd A, Antoine S, Hemingway J, Ranson H, Lycett GJ, Vontas J. (2016) Cytochrome P450 associated with insecticide resistance catalyzes cuticular hydrocarbon production in Anopheles gambiae. Proc Natl Acad Sci U S A. 113:9268-9273.
[Abstract]
Zacharioudaki E, Housden BE, Garinis G, Stojnic R, Delidakis C, Bray SJ. (2016) Genes implicated in stem cell identity and temporal programme are directly targeted by Notch in neuroblast tumours. Development. 143:219-231.
[Abstract]
Bastakis GG, Savvaki M, Stamatakis A, Vidaki M, Karagogeos D. (2015) Tag1 deficiency results in olfactory dysfunction through impaired migration of mitral cells. Development. 142:4318-4328.
[Abstract]
Joëls M, Hoogenraad CC, Poirazi P, Di Luca M. (2015) The Hitchhiker's Guide to a Neuroscience Career. Neuron. 86:613-616.
[Abstract]
Palikaras K, Lionaki E, Tavernarakis N. (2015) Coordination of mitophagy and mitochondrial biogenesis during ageing in C. elegans. Nature. 521:525-528.
[Abstract]
Stratigi K, Kapsetaki M, Aivaliotis M, Town T, Flavell RA, Spilianakis CG. (2015) Spatial proximity of homologous alleles and long noncoding RNAs regulate a switch in allelic gene expression. Proc Natl Acad Sci U S A. 112:E1577-86.
[Abstract]
Andreadis C, Nikolaou C, Fragiadakis GS, Tsiliki G, Alexandraki D. (2014) Rad9 interacts with Aft1 to facilitate genome surveillance in fragile genomic sites under non-DNA damage-inducing conditions in S. cerevisiae. Nucleic Acids Res. 42:12650-12667.
[Abstract]
Konstantinides N, Averof M. (2014) A common cellular basis for muscle regeneration in arthropods and vertebrates. Science. 343:788-791.
[Abstract]
Amprazi M, Kotsifaki D, Providaki M, Kapetaniou EG, Fellas G, Kyriazidis I, Pérez J, Kokkinidis M. (2014) Structural plasticity of 4-α-helical bundles exemplified by the puzzle-like molecular assembly of the Rop protein. Proc Natl Acad Sci U S A. 111:11049-11054.
[Abstract]
Kapsetaki SE, Tzelepis I, Avgousti K, Livadaras I, Garantonakis N, Varikou K, Apidianakis Y. (2014) The bacterial metabolite 2-aminoacetophenone promotes association of pathogenic bacteria with flies. Nat Commun. 5:4401.
[Abstract]
Karakasilioti I, Kamileri I, Chatzinikolaou G, Kosteas T, Vergadi E, Robinson AR, Tsamardinos I, Rozgaja TA, Siakouli S, Tsatsanis C, Niedernhofer LJ, Garinis GA. (2013) DNA damage triggers a chronic autoinflammatory response, leading to fat depletion in NER progeria. Cell Metab. 18:403-415.
[Abstract]
Twigg SR, Vorgia E, McGowan SJ, Peraki I, Fenwick AL, Sharma VP, Allegra M, Zaragkoulias A, Sadighi Akha E, Knight SJ, Lord H, Lester T, Izatt L, Lampe AK, Mohammed SN, Stewart FJ, Verloes A, Wilson LC, Healy C, Sharpe PT, Hammond P, Hughes J, Taylor S, Johnson D, Wall SA, Mavrothalassitis G, Wilkie AO. (2013) Reduced dosage of ERF causes complex craniosynostosis in humans and mice and links ERK1/2 signaling to regulation of osteogenesis. Nat Genet. 45:308-313.
[Abstract]
Sasselli V, Boesmans W, Vanden Berghe P, Tissir F, Goffinet AM, Pachnis V. (2013) Planar cell polarity genes control the connectivity of enteric neurons. J Clin Invest. 123:1763-1772.
[Abstract]
Gouridis G, Karamanou S, Sardis MF, Schärer MA, Capitani G, Economou A. (2013) Quaternary dynamics of the SecA motor drive translocase catalysis. Mol Cell. 52:655-666.
[Abstract]
Gkirtzimanaki K, Gkouskou KK, Oleksiewicz U, Nikolaidis G, Vyrla D, Liontos M, Pelekanou V, Kanellis DC, Evangelou K, Stathopoulos EN, Field JK, Tsichlis PN, Gorgoulis V, Liloglou T, Eliopoulos AG. (2013) TPL2 kinase is a suppressor of lung carcinogenesis. Proc Natl Acad Sci U S A. 110:E1470-1479.
[Abstract]
Deligianni C, Spilianakis CG. (2012) Long-range genomic interactions epigenetically regulate the expression of a cytokine receptor. EMBO Rep. 13:819-826.
[Abstract]
Denaxa M, Kalaitzidou M, Garefalaki A, Achimastou A, Lasrado R, Maes T, Pachnis V. (2012) Maturation-promoting activity of SATB1 in MGE-derived cortical interneurons. Cell Rep. 2:1351-1362.
[Abstract]
Kamileri I, Karakasilioti I, Sideri A, Kosteas T, Tatarakis A, Talianidis I, Garinis GA. (2012) Defective transcription initiation causes postnatal growth failure in a mouse model of NER progeria. Proc Natl Acad Sci U S A. 109:2995-3000.
[Abstract]
Kourtis N, Nikoletopoulou V, Tavernarakis N. (2012) Small heat shock proteins protect from heat stroke-associated neurodegeneration. Nature. 490:213-218.
[Abstract]
Sarrazin AF, Peel AD, Averof M. (2012) A Segmentation Clock with Two-Segment Periodicity in Insects. Science. 336:338-341.
[Abstract]
Troulinaki K, Tavernarakis N. (2012) Endocytosis and intracellular trafficking contribute to necrotic neurodegeneration in C. elegans. EMBO J. 31:654-666.
[Abstract]
Zacharioudaki E, Magadi SS, Delidakis C. (2012) bHLH-O proteins are crucial for Drosophila neuroblast self-renewal and mediate Notch-induced overproliferation. Development. 139:1258-1269.
[Abstract]
Banci L, Bertini I, Calderone V, Cefaro C, Ciofi-Baffoni S, Gallo A, Kallergi E, Lionaki E, Pozidis C, Tokatlidis K (2011) Molecular recognition and substrate mimicry drive the electron-transfer process between MIA40 and ALR. Proc Natl Acad Sci U S A. 108:4811-4816.
[Abstract]
Chen L, Balabanidou V, Remeta DP, Minetti CA, Portaliou AG, Economou A, Kalodimos CG. (2011) Structural instability tuning as a regulatory mechanism in protein-protein interactions. Mol Cell. 44:734-744.
[Abstract]
Knox PG, Davies CC, Ioannou M, Eliopoulos AG. (2011) The death domain kinase RIP1 links the immunoregulatory CD40 receptor to apoptotic signaling in carcinomas. J Cell Biol. 192:391-399.
[Abstract]
Troulinaki K, Tavernarakis N. (2011) Endocytosis and intracellular trafficking contribute to necrotic neurodegeneration in C. elegans. EMBO J. 31:654-666.
[Abstract]
Papadakis G, Tsortos A, Gizeli E. (2010) Acoustic characterization of nanoswitch structures; application to the DNA Holliday Junction. Nano Lett. 10:5093-5097.
[Abstract]
Banci L, Bertini I, Cefaro C, Cenacchi L, Ciofi-Baffoni S, Felli IC, Gallo A, Gonnelli L, Luchinat E, Sideris D, Tokatlidis K. (2010) Molecular chaperone function of Mia40 triggers consecutive induced folding steps of the substrate in mitochondrial protein import. Proc Natl Acad Sci U S A. 107:20190-20195.
[Abstract]
Lynch JA, Peel AD, Drechsler A, Averof M, Roth S. (2010) EGF signaling and the origin of axial polarity among the insects. Curr Biol. 20:1042-1047.
[Abstract]
Monastirioti M, Giagtzoglou N, Koumbanakis K.A, Zacharioudaki E, Deligiannaki M, Wech I, Almeida M, Preiss A, Bray S, Delidakis C. (2010) Drosophila Hey is a target of Notch in asymmetric divisions during embryonic and larval neurogenesis. Development. 137:191-201.
[Abstract]
Artal-Sanz M, Tavernarakis N. (2009) Prohibitin couples diapause signaling to mitochondrial energy metabolism during ageing in Caenorhabditis elegans. Nature. 461:793-797.
[Abstract]
Banci L, Bertini I, Cefaro C, Ciofi-Baffoni S, Gallo A, Martinelli M, Sideris DP, Katrakili N, Tokatlidis K. (2009) MIA40 is an oxidoreductase catalyzing oxidative protein folding in mitochondria. Nat Struct Mol Biol. 16:198-206.
[Abstract]
Gouridis G, Karamanou S, Gelis I, Kalodimos CG, Economou A. (2009) Signal peptides are allosteric activators of the protein translocase. Nature. 462:363-367.
[Abstract]
Pavlopoulos A, Kontarakis Z, Liubicich DM, Seranod JM, Akam M, Patel NH, Averof M. (2009) Probing the evolution of appendage specialization by Hox gene misexpression in an emerging model crustacean. Proc Natl Acad Sci U S A. 106:13897-13902.
[Abstract]
Sideris DP, Petrakis N, Katrakili N, Mikropoulou D, Gallo A, Ciofi-Baffoni S, Banci L, Bertini I, Tokatlidis K. (2009) A novel intermembrane space-targeting signal docks cysteines onto Mia40 during mitochondrial oxidative folding. J Cell Biol. 187:1007-1022.
[Abstract]
Zhou Y, Won J, Karlsson MG, Zhou M, Rogerson T, Balaji J, Neve R, Poirazi P, Silva AJ. (2009) CREB regulates excitability and the allocation of memory to subsets of neurons in the amygdala. Nat Neurosci. 12:1438-1443.
[Abstract]
Bertsias G, Boumpas DT. (2008) Update on the management of lupus nephritis: let the treatment fit the patient. Nat Clin Pract Rheumatol. 4:464-472.
[Abstract]
Tatarakis A, Margaritis T, Martinez-Jimenez CP, Kouskouti A, Mohan WS 2nd, Haroniti A, Kafetzopoulos D, Tora L, Talianidis I. (2008) Dominant and redundant functions of TFIID involved in the regulation of hepatic genes. Mol Cell. 31:531-543.
[Abstract]
Voglis G, Tavernarakis N. (2008) A synaptic DEG/ENaC ion channel mediates learning in C. elegans by facilitating dopamine signalling. EMBO J. 27:3288-3299.
[Abstract]
Gelis I, Bonvin AM, Keramisanou D, Koukaki M, Gouridis G, Karamanou S, Economou A, Kalodimos CG. (2007) Structural Basis for Signal-Sequence, Recognition by the Translocase Motor SecA as Determined by NMR. Cell. 131:756-769.
[Abstract]
Karamanou S, Gouridis G, Papanikou E, Sianidis G, Gelis I, Keramisanou D, Vrontou E, Kalodimos CG, Economou A. (2007) Preprotein-controlled catalysis in the helicase motor of SecA. EMBO J. 26:2904-2914.
[Abstract]
Syntichaki P, Troulinaki K, Tavernarakis N. (2007) elF4E function in somatic cells modulates ageing in Caenorhabditis elegans. Nature. 445:922-926.
[Abstract]
Zacharioudakis I, Gligoris T, Tzamarias D. (2007) A yeast catabolic enzyme controls transcriptional memory. Curr Biol. 17:2041-2046.
[Abstract]
Artal-Sanz M, Samara C, Syntichaki P, Tavernarakis N. (2006) Lysosomal biogenesis and function is critical for necrotic cell death in Caenorhabditis elegans. J Cell Biol. 173:231–239.
[Abstract]
Kyrmizi I, Hatzis P, Katrakili N, Tronche F, Gonzalez FJ, Talianidis I. (2006) Plasticity and expanding complexity of the hepatic transcription factor network during liver development. Genes Dev. 20:2293-2305.
[Abstract]
Boulias K, Katrakili N, Bamberg K, Underhill P, Greenfield A, Talianidis I. (2005) Regulation of hepatic metabolic pathways by the orphan nuclear receptor SHP. EMBO J. 24:2624-2633.
[Abstract]
Kouskouti A, Talianidis I. (2005) Histone Modifications Defining Active Genes Persist After Transcriptional And Mitotic Inactivation. EMBO J. 24:347-357.
[Abstract]
Pavlopoulos A, Averof M. (2005) Establishing genetic transformation for comparative developmental studies in the crustacean Parhyale hawaiensis. Proc Natl Acad Sci U S A. 102:7888-7893.
[Abstract]
Pitsouli C, Delidakis C. (2005) The Interplay Between DSL Proteins And Ubiquitin Ligases In Notch Signaling. Development. 132:4041-4050.
[Abstract]
Syntichaki P, Samara C, Tavernarakis N. (2005) The Vacuolar H + -ATPase mediates intracellular acidification required for neurodegeneration in C. elegans. Curr Biol. 15:1249-1254.
[Abstract]
Copf T, Schröder R, Averof M. (2004) Ancestral role of caudal genes in axis elongation and segmentation. Proc Natl Acad Sci U S A. 101:17711-17715.
[Abstract]
Fadouloglou VE, Tampakaki AP, Glykos NM, Bastaki MN, Hadden JM, Phillips SE, Panopoulos NJ, Kokkinidis M. (2004) Structure of HrcQ(B)-C, a conserved component of the bacterial type III secretion systems. Proc Natl Acad Sci U S A. 101:70-75.
[Abstract]
Fragiadakis GS, Tzamarias D, Alexandraki D. (2004) Nhp6 facilitates Aft1 binding and Ssn6 recruitment, both essential for FRE2 transcriptional activation. EMBO J. 23:333-342.
[Abstract]
Kouskouti A, Scheer E, Staub A, Tora L, Talianidis I. (2004) Gene-specific modulation of TAF10 function by SET9-mediated methylation. Mol Cell. 14:175-182.
[Abstract]
Papamichos-Chronakis M, Gligoris T, Tzamarias D. (2004) The Snf1 kinase controls glucose repression in yeast by modulating interactions between the Mig1 repressor and the Cyc8-Tupl co-repressor. EMBO Rep. 5:368-372.
[Abstract]
Papanikou E, Karamanou S, Baud C, Sianidis G, Frank M, Economou A. (2004) Helicase Motif III in SecA is essential for coupling preprotein binding to translocation ATPase. EMBO Rep. 5:807-811.
[Abstract]
Topalidou I, Papamichos-Chronakis M, Thireos G, Tzamarias D. (2004) Spt3 and Mot1 cooperate in nucleosome remodeling independently of TBP recruitment. EMBO J. 23:1943-1948.
[Abstract]
Zabalou S, Riegler M, Theodorakopoulou M, Stauffer C, Savakis C, Bourtzis K. (2004) Wolbachia-induced cytoplasmic incompatibility as a means for insect pest population control. Proc Natl Acad Sci U S A. 101:15042-15045.
[Abstract]
Copf T, Rabet N, Celniker SE, Averof M. (2003) Posterior patterning genes and the identification of a unique body region in the brine shrimp Artemia franciscana. Development. 130:5915-5927.
[Abstract]
Giagtzoglou N, Alifragis P, Koumbanakis KA, Delidakis C. (2003) Two modes of recruitment of E(spl) repressors onto target genes. Development. 130:259-270.
[Abstract]
Poirazi P, Brannon T, Mel BW. (2003) Arithmetic of Subthreshold Synaptic Summation in a Model CA1 Pyramidal Cell. Neuron. 37:977-987.
[Abstract]
Poirazi P, Brannon T, Mel BW. (2003) Pyramidal Neuron as 2-Layer Neural Network. Neuron. 37:989-999.
[Abstract]
Spilianakis C, Kretsovali A, Agalioti T, Makatounakis T, Thanos D, Papamatheakis J. (2003) CIITA regulates transcription onset viaSer5-phosphorylation of RNA pol II. EMBO J. 22:5125-5136.
[Abstract]
Topalidou I, Thireos G. (2003) Gcn4 occupancy of open reading frame regions results in the recruitment of chromatin-modifying complexes but not the mediator complex. EMBO Rep. 4:872-876.
[Abstract]
Traka M, Goutebroze L, Denisenko N, Bessa M, Nifli A, Havaki S, Iwakura Y, Fukamauchi F, Watanabe K, Soliven B, Girault JA, Karagogeos D. (2003) Association of TAG-1 with Caspr2 is essential for the molecular organization of juxtaparanodal regions of myelinated fibers. J Cell Biol. 162:1161-1172.
[Abstract]
Bolshakov Vn, Topalis P, Blass C, Kokoza E, Della Torre A, Kafatos Fc, Louis C. (2002) A comparative genomic analysis of two distant diptera, the fruit fly, Drosophila melanogaster, and the malaria mosquito, Anopheles gambiae. Genome Res. 12:57-66.
[Abstract]
Christophides GK, Zdobnov E, Barillas-Mury C, Birney E, Blandin S, Blass C, Brey PT, Collins FH, Danielli A, Dimopoulos G, Hetru C, Hoa NT, Hoffmann JA, Kanzok SM, Letunic I, Levashina EA, Loukeris TG, Lycett G, Meister S, Michel K, Moita LF, Müller HM, Osta MA, Paskewitz SM, Reichhart JM, Rzhetsky A, Troxler L, Vernick KD, Vlachou D, Volz J, von Mering C, Xu J, Zheng L, Bork P, Kafatos FC. (2002) Immunity-related genes and gene families in Anopheles gambiae. Science. 298:159-165.
[Abstract]
Damen Wg, Saridaki T, Averof M. (2002) Diverse adaptations of an ancestral gill: a common evolutionary origin for wings, breathing organs, and spinnerets. Curr Biol. 12:1711-1716.
[Abstract]
Hatzis P, Talianidis I. (2002) Dynamics of enhancer-promoter communication during differentiation-induced gene activation. Mol Cell. 10:1467-1477.
[Abstract]
Kyriakopoulou K, De Diego I, Wassef M, Karagogeos D. (2002) A combination of chain and neurophilic migration involving the adhesion molecule TAG-1 in the caudal medulla. Development. 129:287-296.
[Abstract]
Papamichos-Chronakis M, Petrakis T, Ktistaki E, Topalidou I, Tzamarias D. (2002) Cti6, a PHD domain protein, bridges the Cyc8-Tup1 corepressor and the SAGA coactivator to overcome repression at GAL1. Mol Cell. 9:1297-1305.
[Abstract]
Soutoglou E, Talianidis I. (2002) Coordination of PIC assembly and chromatin remodeling during differentiation-induced gene activation. Science. 295:1901-1904.
[Abstract]
Syntichaki P, Xu K, Driscoll M, Tavernarakis N. (2002) Specific aspartyl and calpain proteases are required for neurodegeneration in C. elegans. Nature. 419:939-944.
[Abstract]
Apidianakis Y, Grbavec D, Stifani S, Delidakis C. (2001) Groucho mediates a Ci-independent mechanism of hedgehog repression in the anterior wing pouch. Development. 128:4361-4370.
[Abstract]
Boutla A, Delidakis C, Livadaras I, Tsagris M, Tabler M. (2001) Short 5'-phosphorylated double-stranded RNAs induce RNA interference in Drosophila. Curr Biol. 11:1776-1780.
[Abstract]
Denaxa M, Chan Ch, Schachner M, Parnavelas Jg, Karagogeos D. (2001) The adhesion molecule TAG-1 mediates the migration of cortical interneurons from the ganglionic eminence along the corticofugal fiber system. Development. 128:4635-4644.
[Abstract]
Ligoxygakis P, Strigini M, Averof M. (2001) Specification of left-right asymmetry in the embryonic gut of Drosophila. Development. 128:1171-1174.
[Abstract]
Pavlopoulos E, Pitsouli C, Klueg Km, Muskavitch At, Moschonas Nk, Delidakis C. (2001) Neuralized Encodes A Peripheral Membrane Protein Involved In Delta Signaling And Endocytosis. Dev Cell. 1:807-816.
[Abstract]
Sianidis G, Karamanou S, Vrontou E, Boulias K, Repanas K, Kyrpides N, Politou As, Economou A. (2001) Cross-Talk Between Catalytic And Regulatory Elements In A Dead Motor Domain Is Essential For Seca Function. EMBO J. 20:961-970.
[Abstract]
Soutoglou E, Viollet B, Vaxillaire M, Yaniv M, Pontoglio M, Talianidis I. (2001) Transcription Factor-Dependent Regulation Of Cbp And P/Caf Histone Acetyltransferase Activity. EMBO J. 20:1984-1992.
[Abstract]
Zagoraiou L, Drabek D, Alexaki S, Guy Ja, Klinakis Ag, Langeveld A, Skavdis G, Mamalaki C, Grosveld F, Savakis C. (2001) In Vivo Transposition Of Minos, A Drosophila Mobile Element, In Mammalian Tissues. Proc Natl Acad Sci U S A. 98:11474-11478.
[Abstract]
Averof M, Rokas A, Wolfe KH, Sharp PM. (2000) Evidence For A High Frequency Of Simultaneous Double-Nucleotide Substitutions. Science. 287:1283-1286.
[Abstract]
Klinakis AG, Zagoraiou L, Vassilatis DK, Savakis C. (2000) Genome-Wide Insertional Mutagenesis In Human Cells By The Drosophila Mobile Element Minos. EMBO Rep. 1:416-421.
[Abstract]
Soutoglou E, Katrakili N, Talianidis I. (2000) Acetylation Regulates Transcription Factor Activity At Multiple Levels. Mol Cell. 5:745-751.
[Abstract]
Syntichaki P, Topalidou I, Thireos G. (2000) The Gcn5 Bromodomain Co-Ordinates Nucleosome Remodelling. Nature. 404:414-417.
[Abstract]
Voutsina A, Riva M, Carles C, Alexandraki D. (1999) Sequence divergence of the RNA polymerase shared subunit ABC14.5 (Rpb8) affects selectively the RNA polymerase III assembly in Saccharomyces cerevisiae. Nucleic Acids Res. 27:1047-1055.
[Abstract]
Ligoxygakis P, Bray S, Apidianakis Y, Delidakis C. (1999) Ectopic expression of E(spl) genes has differential effects on different cell fate decisions and underscores the biphasic requirement for Notch activity in wing margin establishment in Drosophila. Development. 126:2205-2214.
[Abstract]
Ligoxygakis P, Yu SY, Delidakis C, Baker NE. (1998) A subset of Notch functions during Drosophila eye development require Su(H) and the E(spl)-C. Development. 125:2893-2900.
[Abstract]
Moustakas A, Kardassis D. (1998) Regulation of the human p21/WAF1/Cip-1 promoter in hepatic cells by functional interactions between Sp1 and Smad family members. Proc Natl Acad Sci U S A. 95:6733-6738.
[Abstract]
Dujon B, Albermann K, Aldea M, Alexandraki D, Ansorge W, Arino J, Benes V, Bohn C, Bolotin-Fukuhara M, Bordonné R, Boyer J, Camasses A, Casamayor A, Casas C, Chéret G, Cziepluch C, Daignan-Fornier B, Dang DV, de Haan M, Delius H, Durand P, Fairhead C, Feldmann H, Gaillon L, Kleine K, et al. (1997) The complete nucleotide sequence of Saccharomyces cerevisiae chromosome XV. Nature. 387:98-102.
[Abstract]
Alifragis P, Poortinga G, Parkhurst SM, Delidakis C. (1997) A network of interacting transcriptional regulators involved in Drosophila neural fate specification revealed by the yeast two-hybrid system. Proc Natl Acad Sci U S A. 94:13099-13104.
[Abstract]
Ktistaki E, Talianidis I. (1997) Modulation of hepatic gene expression by hepatocyte nuclear factor-1. Science. 277:109-112.
[Abstract]
Dimopoulos G, Richman A, della Torre A, Kafatos FC, Louis C. (1996) Identification and characterization of differentially expressed cDNAs of the vector mosquito, Anopheles gambiae. Proc Natl Acad Sci U S A. 93:13066-13071.
[Abstract]
Gogos J, Jingmin J, Bray S, Wan H, Kokkinidis M, Kafatos FC. (1996) Recognition of diverse sequences by Class I zinc fingers: binding properties of an embryonic muscle specific zinc finger regulator of the A/T binding subfamily. Proc Natl Acad Sci U S A. 93:2159-2164.
[Abstract]
Skavdis G, Siden-Kiamos G, Crisanti A, Louis C. (1996) Conserved function of a midgut-specific promoter of Anopheles gambiae in the fruitfly. EMBO J. 15:344-350.
[Abstract]
Ktistaki E, Ktistakis NT, Papadogeorgaki E, Talianidis I. (1995) Recruitment of hepatocyte nuclear factor 4 into specific intranuclear compartments depends on tyrosine phosphorylation that affects its DNA binding and transactivation potential. Proc Natl Acad Sci U S A. 92:9876-9880.
[Abstract]
Loukeris Tg, Arca B, Livadaras I, Dialektaki G, Savakis C. (1995) Introduction Of The Transposable Element Minos Into The Germ-Line Of Drosophila-Melanogaster. Proc Natl Acad Sci U S A. 92:9485-9489.
[Abstract]
Loukeris Tg, Livadaras I, Arca B, Zabalou S, Savakis C. (1995) Gene-Transfer Into The Medfly, Ceratitis-Capitata, With A Drosophila-Hydei Transposable Element. Science. 270:2002-2005.
[Abstract]
Dujon B, Alexandraki D, André B, Ansorge W, Baladron V, Ballesta JP, Banrevi A, Bolle PA, Bolotin-Fukuhara M, Bossier P, et al. (1994) The complete DNA sequence of chromosome XI of Saccharomyces cerevisiae. Nature. 369:371-378.
[Abstract]
Athanasiadis A, Vlassi M, Kotsifaki D, Tucker P, Wilson K.S, Kokkinidis M. (1994) The crystal structure of Pvu II endonuclease reveals extensive structural homologies to Eco RV. Nature Struct. Biol. 1:469-475.
[Abstract]
Favia G, Dimopoulos G, della Torre A, Touré YT, Coluzzi M, Louis C. (1994) Polymorphisms detected by random PCR distinguish between different chromosomal forms of Anopheles gambiae. Proc Natl Acad Sci U S A. 91:10315-10319.
[Abstract]
Franz G, Loukeris Tg, Dialektaki G, Thompson Crl, Savakis C. (1994) Mobile Minos Elements From Drosophila-Hydei Encode A 2-Exon Transposase With Similarity To The Paired Dna-Binding Domain. Proc Natl Acad Sci U S A. 91:4746-4750.
[Abstract]
Gounalaki N, Thireos G. (1994) Yap1p, a yeast transcriptional activator that mediates multidrug resistance, regulates the metabolic stress response. EMBO J. 13:4036-4041.
[Abstract]
Vlassi M, Steif C, Weber P, Tsernoglou D, Wilson KS, Hinz HJ, Kokkinidis M. (1994) Restored heptad pattern continuity does not alter the folding of a 4- a -helix bundle. Nat Struct Biol. 1:706-716.
[Abstract]
Kafetzopoulos D, Thireos G, Vournakis JN, Bouriotis V. (1993) The Primary Structure Of A Fungal Chitin Deacetylase Reveals Function For Two Bacterial Gene Products. Proc Natl Acad Sci U S A. 90:8005-8008.
[Abstract]
Kafetzopoulos D, Martinou A, Bouriotis V. (1993) Bioconversion Of Chitin To Chitosan: Purification And Characterization Of Chitin Deacetylase From Mucor Rouxii. Proc Natl Acad Sci U S A. 90:2564-2568.
[Abstract]
Oliver SG, van der Aart QJ, Agostoni-Carbone ML, Aigle M, Alberghina L, Alexandraki D, Antoine G, Anwar R, Ballesta JP, Benit P, et al. (1992) The complete DNA sequence of yeast chromosome III. Nature. 357:38-46
[Abstract]
Georgakopoulos T, Thireos G. (1992) Two distinct yeast transcriptional activators require the function of the GCN5 protein to promote normal levels of transcription. EMBO J. 11:4146-4152.
[Abstract]
Tzamarias D, Roussou I, Thireos G. (1989) Coupling of GCN4 mRNA translational activation with decreased rates of polypeptide chain initiation in yeast cells. Cell. 57:947-954.
[Abstract]
Mavrothalassitis G, Tzimagiorgis G, Mitsialis A, Zannis V, Plaitakis A, Papamatheakis J, Moschonas N. (1988) Isolation and characterization of cDNA clones encoding human liver glutemate dehydrogenase: Evidence for a small gene family. Proc Natl Acad Sci U S A. 85:3494-3498.
[Abstract]
Thanos D, Mavrothalassitis G, Papamatheakis J. (1988) Multiple regulatory regions on the 5' side of the mouse E alpha gene. Proc Natl Acad Sci U S A. 85:3073-3079.
[Abstract]
Tzamarias D, Thireos G. (1988) Evidence that the GCN2 protein kinase regulates reinitiation by yeast ribosomes. EMBO J. 7:3547-3551.
[Abstract]
Hatzopoulos P, Monastirioti M, Yannopoulos G, Louis C. (1987) The instability of the TE-like mutation Dp(2;2)GYL of Drosophila melanogaster is intimately associated with the hobo element. EMBO J. 6:3091-3096.
[Abstract]
Yannopoulos G, Stamatis N, Monastirioti M, Hatzopoulos P, Louis C. (1987) hobo is responsible for the induction of hybrid dysgenesis by strains of Drosophila melanogaster bearing the male recombination factor 23.5 MRF. Cell. 49:487-495.
[Abstract]
Tzamarias D, Alexandraki D, Thireos G. (1986) Multiple cis-acting elements modulate the translational efficiency of GCN4 mRNA in yeast. Proc Natl Acad Sci U S A. 83:4849-4853.
[Abstract]