Panda M., Fakitsa M., Markaki M. and Tavernarakis N. (2025) Caenorhabditis elegans as an emerging high throughput chronotherapeutic drug screening platform for human neurodegenerative disorders. Advanced Drug Delivery Reviews, Vol 224,115655.
Tsagkari D., Markaki M. and Tavernarakis N. (2025) NHR-85 modulates mitochondrial and lipid homeostasis to protect against α-synuclein aggregation in C. elegans. Journal of Cell Science 138: jcs263651.
Panda M., Markaki M. and Tavernarakis N. (2025) Mitostasis in age-associated neurodegeneration. Biochimica et Biophysica Acta - Molecular Basis of Disease, 1871(1), 167547.
Daskalaki I., Markaki M., Gkikas I. and Tavernarakis N. (2023) Local coordination of mRNA storage and degradation near mitochondria modulates Caenorhabditis elegans ageing. EMBO Journal, 42:e112446.
Markaki M., Tsagkari D. and Tavernarakis N. (2023) Mitophagy and long-term neuronal homeostasis. Journal of Cell Science, 136: jcs260638.
Markaki M., Tsagkari D. and Tavernarakis N. (2021) Mitophagy mechanisms in neuronal physiology and pathology during ageing. Biophysical Reviews, 13: 955-965.
Markaki M. and Tavernarakis N. (2020) Editorial: Autophagy mechanisms and roles: recent advances and implications. FEBS Journal, 287: 5024-5026.
Markaki M. and Tavernarakis N. (2020) Editorial: Mitophagy in physiology and pathology. Mechanisms of Ageing and Development, 190: 111291.
Markaki M. and Tavernarakis N. (2020) Mitochondrial turnover and homeostasis in ageing and neurodegeneration. FEBS Letters, 594: 2370-2379.
Markaki M. and Tavernarakis N. (2020) Caenorhabditis elegans as a model system for human diseases. Current Opinion in Biotechnology, 63, 118-125.
Chen G., Xie W., Nah J., Sauvat A., Liu P., Pietrocola F., Sica V., Carmona-Gutierrez D., Zimmermann A., Pendl T., Tadic J., Bergmann M., Hofer S. J., Markaki M., Tavernarakis N., Domuz L. Lachkar S., Sadoshima J., Madeo F., Kepp O. and Kroemer G. (2019) 3,4-Dimethoxychalcone induces autophagy through activation of the transcription factors TFE3 and TFEB. EMBO Molecular Medicine, 11: e10469.
Kounakis K., Chaniotakis M., Markaki M. and Tavernarakis N. (2019) Emerging roles of lipophagy in ageing and age-related diseases. Frontiers in Cell and Developmental Biology, 7: 185.
Rieckher M., Markaki M., Princz A. and Tavernarakis N. (2018) Maintenance of proteostasis by P body-mediated regulation of eIF4E availability during ageing in Caenorhabditis elegans. Cell Reports, 25: 199-211.
Markaki M., Palikaras K. and Tavernarakis N. (2018) Novel insights into the anti-ageing role of mitophagy. International Review of Cell and Molecular Biology, 340: 169-208 (equal contributionby Markaki M and Palikaras K).
Pietrocola F. *, Castoldi F. *, Markaki M. *, Lachkar S., Chen G., Enot D. P., Durand S., Bossut N., Tong M., Malik S. A., Loos F., Dupont N., Marino G., Abdelkader N., Madeo F., Maiuri M. C., Kroemer R., Codogno P., SadoshimaJ., Tavernarakis N. and Kroemer G. (2018) Aspirin recapitulates features of caloric restriction. Cell Reports, 22: 2395-2407 (*equal contribution).
Palikaras K., Daskalaki I., Markaki M. and Tavernarakis N. (2017) Mitophagy and age-related pathologies: Development of new therapeutics by targeting mitochondrial turnover. Pharmacology and Therapeutics, 178: 154-174.
Lionaki E. *, Markaki M. *, Palikaras K*. and Tavernarakis N. (2015) Mitochondria, autophagy and age-associated neurodegenerative diseases: New insights into a complex interplay. Biochimica et Biophysica Acta-Bioenergetics, 1847: 1412-1423 (*equal contribution).
Niso-Santano M., Malik S. A., Pietrocola F., Bravo-San Pedro J. M., Mariño G., Cianfanelli V., Ben-Younès A., Troncoso R., Markaki M., Sica V., Izzo V., Chaba K., Bauvy C., Dupont N., Kepp O., Rockenfeller P., Wolinski H., Madeo F., Lavandero S., Codogno P., Harper F., Pierron G., Tavernarakis N., Cecconi F., Maiuri M. C., Galluzzi L. and Kroemer G. (2015) Unsaturated fatty acids induce non-canonical autophagy. EMBO Journal, 34: 1025-1041.
Kyriakakis E.*, Markaki M.* and Tavernarakis N. (2015) Caenorhabditis elegans as a model for cancer research. Molecular and Cellular Oncology, 2: e975027 (*equal contribution).
Büttner S., Broeskamp F., Sommer C., Markaki M., Habernig L., Alavian-Ghavanini A., Carmona-Gutierrez D., Eisenberg T., Michael E., Kroemer G., Tavernarakis N., Sigrist S. J. and Madeo F. (2014) Spermidine protects against α-synuclein neurotoxicity. Cell Cycle, 13: 3903-3908.
Kypri E., Cristodoulou A., Maimaris Y., Lethan M., Markaki M., Lyssandrou C., Lederer C. W., Tavernarakis N., Geimer S., Pedersen L. B. and Santama N. (2014) The nucleotide binding proteins Nubp1 and Nubp2 are negative regulators of ciliogenesis. Cellular and Molecular Life Sciences, 71: 517-538.
Nikoletopoulou V., Markaki M., Palikaras K. and Tavernarakis N. (2013) Crosstalk between apoptosis, necrosis and autophagy. Biochimica et Biophysica Acta-Molecular Cell Research, 1833: 3448-3459.
Buttner S., Habernig L., Broeskamp F., Ruli D, Vogtle F. N., Vlachos M., Macchi F., Kuttner V., Carmona-Gutierrez D., Eisenberg T., Ring J., Markaki M., Taskin A. A., Benke S., Ruckenstuhl C., Braun R., Van den Haute C., Bammens T., van der Perren A., Frohlich K.-U., Winderickx J., Kroemer G., Baekelandt V., Tavernarakis N., Kovacs G. G., Dengjel J., Mesinger C., Sigrist S. J. and Madeo F. (2013) Endonuclease G mediates a-synuclein cytotoxicity during Parkinson's disease. EMBO Journal, 32: 3041-3054.
Kalajdzic P., Markaki M., Oehler S. and Savakis C. (2013) Imidacloprid does not induce Cyp genes involved in insecticide resistance of a mutant Drosophila melanogaster line. Food and Chemical Toxicology 60, 355–359.
Kalajdzic P., Oehler S., Markaki M. and Savakis C. (2013) Toxicology and cytogenetic analysis of a Drosophila melanogaster mutant resistant to imidacloprid and DDT. Genetica, 45, No. 3, 929-938.
Markaki M. and Tavernarakis N. (2013) Metabolic control by TOR and autophagy during ageing. Gerontology, 59, 340-348.
Lionaki E*., Markaki M.* and Tavernarakis N. (2012) Autophagy and ageing: Insights from invertebrate model organisms. Ageing Research Reviews, 12: 413-428 (*equal contribution).
Klionsky D. J., ... Markaki M., ... Tavernarakis N., et al. (2012) Guidelines for the use and interpretation of assays for monitoring autophagy. Autophagy, 8: 445-544.
Markaki M. and Tavernarakis N. (2011) The role of autophagy in genetic pathways influencing ageing. Biogerontology, 12: 377-386.
Markaki M. and Tavernarakis N. (2010) Modelling human diseases in Caenorhabditis elegans. Biotechnology Journal, 5: 1261-1276.
Morcelli E., Maiuri M.C., Markaki M., Megalou E., Pasparaki A., Palikaras K., Galuzzi L., Criolo A., Malik S.A., Madeo F., Tavernarakis N. and Kroemer G. (2010) The lifespan –prolonging effect of sirtuin-1 is mediated by autophagy. Autophagy, 6:186-188.
Morcelli E., Maiuri M.C., Markaki M., Megalou E., Pasparaki A., Palikaras K., Galuzzi L., Criolo A., Malik S.A., Madeo F., Tavernarakis N. and Kroemer G. (2009) Caloric restriction and resveratrol prolong longevity via the sirtuin-1 mediated induction of autophagy. Cell death and disease, 1:1-10.
Markaki M., Drabek D., Livadaras I., Craig R.K., Grosveld F. and Savakis C. (2007) Stable expression of human growth hormone over 50 generations in transgenic insect larvae. Transgenic Res., 16:99-107.
Markaki M., Craig R.K. and Savakis C. (2004) Insect Population Control Using Female Specific Pro-drug Activation. Insect Biochem. Mol. Biol., 34: 131-137.
